Gene Spro_4790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4790 
Symbol 
ID5604976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5309965 
End bp5310993 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content57% 
IMG OID640940363 
ProductDNA-binding transcriptional regulator CytR 
Protein accessionYP_001481011 
Protein GI157373022 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000120208 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGAACACA AGAAAGAATT ATCCATGGCA ACCATGAAAG ACGTTGCCGA AATGGCGGGC 
GTTTCAACGG CAACCGTGTC GCGTGCGCTG ATGAACCCGG AAAAGGTGTC AACGCCGACG
CGTCAGAAAG TGGAACAGGC CGTACTGGCC GTGGGCTATT CTCCTCATGC CCTCTCTCGC
AATATCAAGC GTAACGAATC CCGGACTATC CTGGTGATCG TCCCCGACAT TTGCGATCCG
TTTTTCGCCG ATGTGATCCA GGGGATCGAG CAAACCGCCG CACAACAGGG CTACCTGGTG
CTGATTGGTG ACTGTGCTCA GCAAAACCAG CAGGAACGCA CCTTCGTCAA CCTGATCATT
ACCAAACAAA TCGATGGCAT GCTGCTGCTC GGCTCCAACC TGCCGTTCGA TGCCAGCAAG
GAAGAGCAGC GTAACCTGCC GCCGATGGTG ATGGCCAACG AGTTTGCTCC GGAGCTGGAA
CTGCCGACGG TGCACATCGA TAACCTGACC GCCGCCTTCG AAGCCGTGCA TTATTTACAT
CAGCTCGGCC ACCAGCAAAT CGCCTGTGTC GCCGGGCCGG AACAGATGCC GCTCAGCCAT
TATCGCCTGC AAGGTTACAT TCAGGCGCTA CGTCGTAATG GCATTACCGT CGAAAGCAGC
TATATTACCC GGGGTGATTT CACCTACGAG GCTGGCGCTC AGGCGCTGGC AACGTTGATG
GCACAGCCAA AACCGCCGAC GGCAGTGTTC TGCCACAGTG ATGTGATGGC CATTGGCGTG
CTGTCGCAGG CGAAAAAGAT GGGGCTGCGG GTACCGCAGG ACCTTTCTAT CATCGGCTTT
GACGACATCA AACTGGCGCA GTATTGCGAT CCACCGTTAA CCACAGTGGC TCAACCGCGC
TACCAGATTG GCCAGCAGGC CATGTTATTG CTGTTGGAGC AGCTACACGG GCAGACCGTG
GCAAGCGGCT CCCGGCTATT GGACAGTGAA TTGATTATCA GAGGCAGCAC CGCTGCCCCG
AAACGCTAG
 
Protein sequence
MEHKKELSMA TMKDVAEMAG VSTATVSRAL MNPEKVSTPT RQKVEQAVLA VGYSPHALSR 
NIKRNESRTI LVIVPDICDP FFADVIQGIE QTAAQQGYLV LIGDCAQQNQ QERTFVNLII
TKQIDGMLLL GSNLPFDASK EEQRNLPPMV MANEFAPELE LPTVHIDNLT AAFEAVHYLH
QLGHQQIACV AGPEQMPLSH YRLQGYIQAL RRNGITVESS YITRGDFTYE AGAQALATLM
AQPKPPTAVF CHSDVMAIGV LSQAKKMGLR VPQDLSIIGF DDIKLAQYCD PPLTTVAQPR
YQIGQQAMLL LLEQLHGQTV ASGSRLLDSE LIIRGSTAAP KR