Gene Spro_4782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4782 
Symbol 
ID5604722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5297484 
End bp5298629 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content60% 
IMG OID640940355 
Productacetylornithine deacetylase 
Protein accessionYP_001481003 
Protein GI157373014 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID[TIGR01892] acetylornithine deacetylase (ArgE) 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00142352 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAATTAC CTCCATTTAT TGAGCTGTAC CGGGCGTTGA TCGCCACTCC GTCGATCAGC 
GCCACCGATG GCGCCCTCGA TCAGAGTAAT GAAGCGTTAA TCAACTTGCT GGCCGGCTGG
TTTGCCGATT TGGGCTTTCG CGTCGACGTG CAGCCGGTGC CGGACAGCCG CAACAAATTC
AACCTGCTGG CCAGCATTGG CGAAGGCAGC GGTGGCCTGC TGCTGGCGGG TCACACCGAC
ACCGTGCCTT ATGATGAAGG CCGCTGGACG CGCGACCCTT TCACCCTGAC CGAACACGAC
AATAAGCTGT ACGGTCTGGG CACCGCCGAT ATGAAAGGCT TCTTTGCCTT TATTCTGGAT
GCGGTACGCG ACATCGACGC CAGCCAACTG ACCAATCCTT TATACATTCT GGCCACCGCA
GATGAAGAAA CGACGATGGC CGGCGCACGT TATTTTGCCG CCTCGACCAG CATCCGTCCG
GACTTCGCCA TTATCGGTGA GCCAACCTCG CTGCAGCCGG TACGCGCGCA CAAGGGCCAC
ATAGCCAACG CCATCCGCAT CGTCGGCCAA TCCGGCCACT CGAGTGACCC GGCGCGCGGC
GTGAACGCCA TCGATTTGAT GCATGAAACC ATCGGCCGCC TGATGGAACT GCGCAAAACG
TTGCAAGAGC GCTTTAACAA CCCGGCCTTT GCCGTGCCCT ACCCGACCAT GAACTTCGGT
CATATCAACG GGGGCGATGC GGCCAACCGT ATCTGCGCCT GCTGCGAGCT GCATCTGGAT
ATCCGCCCGT TACCGGGCAT GACGCTCGAC AACATCAACG AACTGATGCA GCAAACGCTG
GAGCCAGTCA GCCAGCGCTG GCCGGGCCGC CTGAGTATTG AGGAGCTGCA CGCCTCGGTA
CCGGGCTATG AGTGCCCGAC CGATCACCAT ATGGTGGCGG TGATTGAGAA ACTGCTGGGC
ACCCGCACGC AGGTGGTCAA CTATTGCACT GAGGCTCCCT TCGTCCAGCA GGTCTGCCCG
ACGCTGGTGT TGGGCCCTGG CTCTATCGAC CAGGCGCATC AACCGGACGA ATACATAGAT
ACCGGCTTTA TCGAACCGAC GCGCAAGCTG CTGGGTCAGT TGGTCAGCCA CTTCTGCCGC
CAATAA
 
Protein sequence
MKLPPFIELY RALIATPSIS ATDGALDQSN EALINLLAGW FADLGFRVDV QPVPDSRNKF 
NLLASIGEGS GGLLLAGHTD TVPYDEGRWT RDPFTLTEHD NKLYGLGTAD MKGFFAFILD
AVRDIDASQL TNPLYILATA DEETTMAGAR YFAASTSIRP DFAIIGEPTS LQPVRAHKGH
IANAIRIVGQ SGHSSDPARG VNAIDLMHET IGRLMELRKT LQERFNNPAF AVPYPTMNFG
HINGGDAANR ICACCELHLD IRPLPGMTLD NINELMQQTL EPVSQRWPGR LSIEELHASV
PGYECPTDHH MVAVIEKLLG TRTQVVNYCT EAPFVQQVCP TLVLGPGSID QAHQPDEYID
TGFIEPTRKL LGQLVSHFCR Q