Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_4738 |
Symbol | |
ID | 5603874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 5237497 |
End bp | 5240511 |
Gene Length | 3015 bp |
Protein Length | 1004 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640940304 |
Product | outer membrane autotransporter |
Protein accession | YP_001480959 |
Protein GI | 157372970 |
COG category | [S] Function unknown |
COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain [TIGR02601] autotransporter-associated beta strand repeat |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTTTTTT GTCTGGCGGC GATCGGTGGA GCGCAGGCTA CACCTTATGT AGAGAGCGGC AAGCCGGGCG ATCCTGCGAG TTGGCGCAGT AATGAATTTA ACGCCGAATG GGGCCTGGGA GCGATCCACG CCGATCAGGC CTACGCCGCC GGTTATAGCG GGAAAGGCGT AAAACTCGGC ATTTTCGATC AACCGGTGTA TGCCAAACAT CCGGAGTTTG CCAGCCAGGG CAAAGTGATC AATCTGGTCA CTACCGGCAT TCGCGAATAC ACCGATCCCT ACATTCCGGT GAAAAAAGGC GACGTATTCC GCTATGACGG TACGCCGAGC GTGGATTCCG ACGGCACCCT GGGTTCACAC GGCACCCATG TGGGCGGCAT TGCTGCCGGC AACCGCGATG GTGGTGAGAT GCACGGCGTG GCGTTCAACG CACAAATCAT CAGCGCGGAA AACGGCGACC CCGGGCCGGA AGATGGCATC ATTCTCGGCA ACGATGGCGC GGTATACCAG GCCGGCTGGG ATGCGTTGAT CGCCAGCGGC GCGCGCATTA TCAACAACAG CTGGGGTATT GGCATCACTG AGAAGTTTGA TCAGGGCGGC AAGGATCCGG CCTATCCCCA CTTCACGCTC GCCGACGCGC AAAAGCAATT CGATCAAATC AAACAGATCC TCGGCACAAA AGCCGGTGGC GCTTATCAGG GCGCGATCGA TGCGGCACGC AGCGGCATCG TCACCATTTT TGCCGCCGGT AACGATTACA ACCTCAATAA CCCGGACGCC ATGGCCGGGC TGGCCTATTT CGTGCCGGAG ATAGCTCCCA ACTGGCTGTC GGTCGCCAGT CTGCAGGATC CGAACAACAC CGGCGACTAC AGCATCAGCA CCTTCTCCTC CCGCTGTGGC TATACCGCCA GCTTCTGCGT TGCCGCGCCG GGCAGCAAGG TTTACAGCTC AATCATCGAA GGCAACAGCG TAGATAACCT GACCACCGGT TATGCCAAAT ACAGCGGGAC CTCAATGGCG GCGCCGCACG TGGCCGGCAG CATTGCGGTG CTGATGGAGC GCTTCCCGTA CATGACCGGC GCACAGGTTG CCTCGGTGCT GAAGACCACC ACCACCGATA TGGGCGCGCC GGGTATCGAT GCGCTGTACG GCTGGGGGAT GATCAATCTG GGCAAGGCGA TTAACGGTCC GGGCATGTTT GTTACCGAGC AGGACATTCC TGAAGAGTTT CGGGTTAGCG GCGCTTACGG CCCGGAGCAG TTCGTGGTGA ATCTGCCGGG CGTCGGTGCG GTGCTGGACA AGGGCAAACC GACCGAGCGC GTGTGTGACG ATACGCATTG CGGGTTGGAT GTCTGGAGCA ACAACATTTC CGGTCACGGC GGCCTGACCA AACAGGGTAT CGGCACCCTG GTGCTGACCG GCAACAACAG CTACGCGGGG CCGACGCTGA TCAATCAGGG CCTGCTGGCG ATCAACGGCT CGGTGACTTC CAACGTCACG GTGCAAAACG CCGGCGTGCT GGGCGGTTCC GGCACGGTCG GGTCACTGAC CGCCCGCAGC GGCGGTACCG TGGCACCGGG CAACTCGATC GGCACGCTGA ACGTGACGCG TAACGTAAGC TTCGAGCCGG GTTCCCGCTA TGCGGTGGAA GTGGCGCCCA ATGGCCAGAG CGATCGGATC CAAAGCAGCG GATCGGCGAC GATCGGCGGC GGTGAAGTCG TGGTGTTGCA GGAACAAAAC GCCAACCTGC TGTCGCAAGG TAGCGTGAGC AGCCTGCTGG GCCGCCAGTA CAATATTCTG ACCGCCCAGC AGGGTATCAG TGGGCAGTTT GCTTCCACTT CAACTTTCTC TCCCTTCCTG GGCGCCGGGC TGACCTATCA ACCCAATCAG GTCACGCTGA ACGTTGGCCG TAACGACACC TCCTTTGCCA GCGTGGCTGC CACTCAGAAT GAGCGTGCGG TAGCGGCAGC GGCGGATGCC CTGGCGGCAG GCAACCCGGT GTACGAGAGC ATCCTCAATG CTGGCTCTAC AGGGGAAGCG CGTCAGGCAT TCCGTCAGCT GTCCGGGCAG ATCCACGCGG ATATCGCCTC GGCGCAGGTG AACGACAGCC GTTACCTGCG TGATGCGCTG AACGGCCGTC TGCGACAGGC GGAAGGGCTG GCAACCTCGC CGGACATCAA GGCAGACGAC GACGGCGGTG CCTGGGCGCA ACTGCTGGGA GCCTGGGACC ATGCGTCGGG CGATGCCAAT GCCACCGGCT ATCAGGCATC GACCTACGGC GTGCTGGTGG GGCTGGACTC GGCGCTGGCG GACGACTGGC GGCTGGGGGT GGCGACCGGC TACACCCGCA CCTCGCTGGA CGGCGGCTAC GGCTCGAATG CCGACAGCGA CAACTACCAC CTGGCAGTGT ATGGCGGCAA ACAGTTCGGA GAACTGGCGC TGCGTGCCGG TGGTGGCTAC ACCTGGCACC GCTTCGATAC CTCGCGTTCG GTCAATTACG GCATGCAGTC AGATCGGGAA ACCGCAAAAT ACAGTGCGCG CACCGAGCAG GTGTTTGCCG AAGCGGGTTA CAGCGTGAAG GCCGATTGGG TGAATCTGGA GCCGTTCGCC AACCTGGCGT ACATCAACTT CCAGAACAAC GGTATCTCGG AGGACGGCGG GGCGGCGGCG CTGCAGGGCG ACAAGCAACA CACCGACGCG ACCGTCTCGA CGCTGGGGCT GCGTGCGGAT ACCGAGTGGC AGGCGAGCAA AACCACGTCG GTGGCGCTGC GCAGCGAACT GGGCTGGCAG CATCAGTACG GCGATTTGGA TCGTGGCACC GGGCTGCGCT TCAACGGGGG TAATTCCCCG TTTGTGGTGA ACAGCGTGTC GGCCTCGCGT GACGGTGCGG TGCTGAAAGC CAGTGCGGAA GTGGCGGTGA ACAAGAACGC CACGCTGTCG CTGGGCTACG GCGGGTTGCT GTCGCAAAAC TACCAGGACA ACAGCGTCAA CGCTGGCTTC ACCTGGAAAT TCTGA
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Protein sequence | MLFCLAAIGG AQATPYVESG KPGDPASWRS NEFNAEWGLG AIHADQAYAA GYSGKGVKLG IFDQPVYAKH PEFASQGKVI NLVTTGIREY TDPYIPVKKG DVFRYDGTPS VDSDGTLGSH GTHVGGIAAG NRDGGEMHGV AFNAQIISAE NGDPGPEDGI ILGNDGAVYQ AGWDALIASG ARIINNSWGI GITEKFDQGG KDPAYPHFTL ADAQKQFDQI KQILGTKAGG AYQGAIDAAR SGIVTIFAAG NDYNLNNPDA MAGLAYFVPE IAPNWLSVAS LQDPNNTGDY SISTFSSRCG YTASFCVAAP GSKVYSSIIE GNSVDNLTTG YAKYSGTSMA APHVAGSIAV LMERFPYMTG AQVASVLKTT TTDMGAPGID ALYGWGMINL GKAINGPGMF VTEQDIPEEF RVSGAYGPEQ FVVNLPGVGA VLDKGKPTER VCDDTHCGLD VWSNNISGHG GLTKQGIGTL VLTGNNSYAG PTLINQGLLA INGSVTSNVT VQNAGVLGGS GTVGSLTARS GGTVAPGNSI GTLNVTRNVS FEPGSRYAVE VAPNGQSDRI QSSGSATIGG GEVVVLQEQN ANLLSQGSVS SLLGRQYNIL TAQQGISGQF ASTSTFSPFL GAGLTYQPNQ VTLNVGRNDT SFASVAATQN ERAVAAAADA LAAGNPVYES ILNAGSTGEA RQAFRQLSGQ IHADIASAQV NDSRYLRDAL NGRLRQAEGL ATSPDIKADD DGGAWAQLLG AWDHASGDAN ATGYQASTYG VLVGLDSALA DDWRLGVATG YTRTSLDGGY GSNADSDNYH LAVYGGKQFG ELALRAGGGY TWHRFDTSRS VNYGMQSDRE TAKYSARTEQ VFAEAGYSVK ADWVNLEPFA NLAYINFQNN GISEDGGAAA LQGDKQHTDA TVSTLGLRAD TEWQASKTTS VALRSELGWQ HQYGDLDRGT GLRFNGGNSP FVVNSVSASR DGAVLKASAE VAVNKNATLS LGYGGLLSQN YQDNSVNAGF TWKF
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