Gene Spro_4704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4704 
Symbol 
ID5607172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5199330 
End bp5199800 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content54% 
IMG OID640940270 
Producttripartite ATP-independent periplasmic transporter DctQ 
Protein accessionYP_001480925 
Protein GI157372936 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGAA AGTTATTGGT TAATCTTGAC GATATTCTCG CCTGCCTGGT GTTGACTGCG 
ATTGTGGCGA TAACGGTACT GGCGGTAGTG ATGCGTTACC TGGTGCATGC GCCGTTGCCC
TGGGTGGAAG AGCTGCAATT AGCGCTCTAT CTGTGGGCCA TTATGCTGGG GGCGGTCAGC
GCAATGAAGC GGCGCAAGCA TGTCGGCATT GATGTTTTTG TCAATCTGTT GCCCGCAAGT
GCCCGCCGGC TGGTGCTTTA TTGGAACGAT GCCTTGAGCA TAGTTGTCTT GCTGTCGTTT
GCCTGGCTTG GTTTGATGCT GGCGGAAGGT GCGGGAGAAA AGATCACCCC GATCCTCGGT
ATTCGTTACC GCTGGATCGA TATGGCGATC CCGGTGGGGT CATTGCTGAT GGTGCTGCAA
TTGGTCGTCA ACCTATGTTA CCGCGACAAA CGCATGGGAG AATCATCATG A
 
Protein sequence
MIRKLLVNLD DILACLVLTA IVAITVLAVV MRYLVHAPLP WVEELQLALY LWAIMLGAVS 
AMKRRKHVGI DVFVNLLPAS ARRLVLYWND ALSIVVLLSF AWLGLMLAEG AGEKITPILG
IRYRWIDMAI PVGSLLMVLQ LVVNLCYRDK RMGESS