| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4701 |
|---|
| Symbol | |
|---|
| ID | 5607394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 5195187 |
|---|
| End bp | 5197229 |
|---|
| Gene Length | 2043 bp |
|---|
| Protein Length | 680 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640940267 |
|---|
| Product | oligopeptidase A |
|---|
| Protein accession | YP_001480922 |
|---|
| Protein GI | 157372933 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0339] Zn-dependent oligopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAATC CGTTGCTGAC CCCGTTTTCC CTGCCACCGT TTTCCGCCAT TCGCCCAGAA
GATATCGTGC CTGCGGTGCA ATCCGCATTG GCCGATTGCC GCGCTGCGGT AGAGCGCGTT
GTCGCGCAGC CGGGGCCATT CACCTGGGAT AACCTGTGTC AGCCGCTGGC GGAGTCTGAC
GATCGCCTGT CGCGCATCTG GTCGCCGGTG GGGCATTTGA ACTCGGTAAA AAACAGCCCG
GAACTGCGTG CCGCCTATGA GCAGGCGTTG CCGTTGCTGT CTGAGTACGG CACCTGGGTT
GGGCAACACG AAGGTTTGTA TCAGGCGTAC CGCAGCCTGA AAGAAGGCGA AGCCTTCAAT
CAACTGACCG CACCACAGCG CAAGTCGGTA GAAAATGCGC TGCGTGATTT TGAGCTGTCG
GGCATCGGCC TGTCGCCGGA AAAACAGCGT CGCTATGGTG AAATCGTCGC GCGTCTGTCC
GAGCTGGGTT CTACCTACAG CAACAACGTG CTCGACGCCA CCATGGGTTG GAGCAAGCTG
ATTACCAATG AAACCGAGCT GAGCGGCCTG CCGGAAAGCG CGTTGGCCCA GGCTCAGGCG
ATGGCGCAGG CCAAAGAGCA GGACGGCTGG CTGCTGACGC TGGATATGCC GAGCTATCTG
CCGGTACTGA CCTACGGCGA CAACCGCGCA CTGCGTGAAG AGATGTATCG CGCCTTCGCT
ACCCGCGCTT CCGATCAGGG GCCGAATGCC GGTAAGTGGG ACAACAGCGA AGTGATGGCG
GAAACGCTGG CGCTGCGCCA TGAACTGGCC CAACTGCTGG GCTTTGACAG CTACGCCGAC
AAATCGCTGG CGACCAAAAT GGCGGAAAAC CCGGAGCAGG TGCTCGGTTT CCTCAGCGAT
CTGGCCAAAC GCGCCCGTCC ACAGGCCGAG CAGGAATTGG CGCAGCTGCG CGCCTTCGCC
AAACAGCATT ACGGCGTAGA TGAACTGGAA GCCTGGGACA TTACCTATTA CGGCGAAAAA
CAGAAACAAC ACCTGTTCTC GATCAGCGAC GAGCAACTGC GCCCGTACTT CCCGGAACAG
CGGGTGGTGG AAGGTCTGTT CGAAGTGGTC AAACGCATTT ACGGCATCAC TGCCAAAGAG
CGCAAGGATG TGGATACCTG GCATCCAGAG GTGCGCTTCT TTGATCTGTT CGACGCCAAC
GGCGAGCTGC GCGGCAGCTT CTACCTTGAC CTGTATGCGC GTGAAAACAA ACGCGGCGGG
GCGTGGATGG ACGACTGCGT CGGCAGCCTG CGCAAGGCCA ACGGCGAACT ACAAAAACCG
GTCGCCTATC TGACCTGTAA CTTTAACCGT CCGCTGGGCG ACAAGCCGGC GCTGTTCACC
CATAACGAAG TGACCACCTT GTTCCACGAG TTCGGCCACG GTCTGCACCA TATGCTGACC
CAGATCGACA CCGCCGGCGT TTCCGGCATC AGCGGTGTGC CATGGGATGC GGTCGAACTG
CCAAGCCAGT TTATGGAAAA CTGGTGCTGG GAGCCGGAAG CGCTGGCGTT TATCTCCGGC
CACTATCAGA GCGGTGAACC GCTGCCGAAA GAGATGCTCG ACAAGCTGCT GGCCGCCAAA
AATTACCAGG CGGCGCTGTT TATTCTGCGT CAGTTGGAGT TCGGCCTGTT CGACTTCCGC
ATGCACGCCG AATACAACCC TTCAAGCGGC GCGCAGATCC TGCCAACCTT GGCGGAAGTG
AAGAAAATGG TGGCGGTGGT ACCTTCACCA AGCTGGGGCC GTTTCCCACA TGCTTTCAGC
CATATCTTCG CTGGCGGCTA CGCGGCGGGC TACTACAGCT ACCTGTGGGC GGAAGTGCTG
TCGGCCGATG CCTATTCGCG CTTTGAGGAA GAGGGGATTT TCAACGCCGA AACCGGTAAA
TCCTTCCTCG ACAACATCCT GTCGCGCGGC GGTTCGGAAG AGCCGATGGA ACTGTTCAAA
CGCTTCCGTG GCCGTGAGCC GCAGCTGGAT GCTATGCTGC GCCATTACGG CATTAAAGGA
TAA
|
|---|
| Protein sequence | MTNPLLTPFS LPPFSAIRPE DIVPAVQSAL ADCRAAVERV VAQPGPFTWD NLCQPLAESD
DRLSRIWSPV GHLNSVKNSP ELRAAYEQAL PLLSEYGTWV GQHEGLYQAY RSLKEGEAFN
QLTAPQRKSV ENALRDFELS GIGLSPEKQR RYGEIVARLS ELGSTYSNNV LDATMGWSKL
ITNETELSGL PESALAQAQA MAQAKEQDGW LLTLDMPSYL PVLTYGDNRA LREEMYRAFA
TRASDQGPNA GKWDNSEVMA ETLALRHELA QLLGFDSYAD KSLATKMAEN PEQVLGFLSD
LAKRARPQAE QELAQLRAFA KQHYGVDELE AWDITYYGEK QKQHLFSISD EQLRPYFPEQ
RVVEGLFEVV KRIYGITAKE RKDVDTWHPE VRFFDLFDAN GELRGSFYLD LYARENKRGG
AWMDDCVGSL RKANGELQKP VAYLTCNFNR PLGDKPALFT HNEVTTLFHE FGHGLHHMLT
QIDTAGVSGI SGVPWDAVEL PSQFMENWCW EPEALAFISG HYQSGEPLPK EMLDKLLAAK
NYQAALFILR QLEFGLFDFR MHAEYNPSSG AQILPTLAEV KKMVAVVPSP SWGRFPHAFS
HIFAGGYAAG YYSYLWAEVL SADAYSRFEE EGIFNAETGK SFLDNILSRG GSEEPMELFK
RFRGREPQLD AMLRHYGIKG
|
|---|
| |