Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_4538 |
Symbol | rpsC |
ID | 5603539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 5019176 |
End bp | 5019874 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640940104 |
Product | 30S ribosomal protein S3 |
Protein accession | YP_001480759 |
Protein GI | 157372770 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0092] Ribosomal protein S3 |
TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000472984 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0021179 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGTCAGA AAGTACATCC TAATGGTATT CGCCTGGGTA TTGTCAAACC TTGGAACTCT ACTTGGTATG CGAATACCAA AGAATTCGCT GACAACCTGG ACAGCGACTT TAAAGTTCGC CAATTCCTGA TTAAGGAACT GGCGAAAGCT TCCGTTTCTC GCATCGTTAT CGAGCGTCCT GCGAAGAGTA TCCGTGTGAC TATTCACACT GCTCGTCCAG GCATCGTTAT CGGCAAGAAA GGTGAAGATG TCGAAAAACT GCGTAAGGTC GTAGCGAACA TCGCTGGCGT TCCTGCGCAA ATTAACATCG CCGAAGTCCG TAAACCGGAA CTTGACGCTA AATTGGTTGC TGACAGCATC ACTTCACAGT TGGAACGTCG CGTTATGTTC CGTCGTGCTA TGAAGCGTGC TGTACAGAAC GCAATGCGTC TTGGCGCTAA AGGTATCAAA GTTGAAGTAA GCGGCCGCCT TGGCGGTGCT GAAATCGCGC GTACCGAATG GTACCGTGAA GGTCGTGTTC CGTTGCATAC ACTGCGTGCG GATATCGATT ACAACACATC TGAAGCGCAC ACCACTTATG GTGTAATCGG CGTTAAGGTA TGGATCTTCA AAGGTGAGAT CCTGGGTGGT ATGGCTGCAG TTGAACAACC GGAACCGGCT GCTCAACCTA AAAAGCAGCA GCGTAAAGGC CGCAAGTAA
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Protein sequence | MGQKVHPNGI RLGIVKPWNS TWYANTKEFA DNLDSDFKVR QFLIKELAKA SVSRIVIERP AKSIRVTIHT ARPGIVIGKK GEDVEKLRKV VANIAGVPAQ INIAEVRKPE LDAKLVADSI TSQLERRVMF RRAMKRAVQN AMRLGAKGIK VEVSGRLGGA EIARTEWYRE GRVPLHTLRA DIDYNTSEAH TTYGVIGVKV WIFKGEILGG MAAVEQPEPA AQPKKQQRKG RK
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