| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4524 |
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| Symbol | secY |
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| ID | 5602679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | - |
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| Start bp | 5012761 |
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| End bp | 5014092 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640940090 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_001480745 |
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| Protein GI | 157372756 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000295503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000897343 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCTAAGC AACCAGGATT AGATTTTCAA AGTGCTAAAG GCGGGCTCGG CGAGCTGAAG
CGCAGACTTT TGTTTGTAAT CGGCGCGCTG ATTGTCTTCC GTATCGGCTC TTTTATTCCG
ATTCCTGGTA TCGATGCCAC TGTGCTTGCC AAATTGCTCG AGCAGCAGAG AGGCACTATC
ATTGAAATGT TTAACATGTT CTCTGGTGGT GCCCTCAGCC GTGCTTCTAT CTTTGCCCTG
GGGATCATGC CGTATATTTC GGCGTCGATC ATTATCCAGC TGTTAACGGT GGTTCATCCA
GCGTTAGCAG AAATCAAGAA AGAAGGGGAG GCTGGCCGTC GCAAGATTAG TCAGTACACC
CGTTACGGTA CGCTGGTGTT GGCTATATTC CAGTCGATCG GTATTGCTAC CGGTTTGCCG
AATATGCCTG GTATGCAAGG TCTGGTGTTA AACCCAGGCT TTGCGTTCTA CTTTACTGCA
GTAGTGAGCT TGGTTACCGG GACAATGTTC CTGATGTGGC TGGGTGAACA GATTACTGAA
CGTGGTATCG GTAACGGTAT CTCGATCATT ATCTTTGCAG GCATTGTAGC GGGACTCCCG
CCGGCTGTGG CCCATACTAT CGAACAAGCC CGGCAAGGCG ACCTGCACTT CCTCCTGTTG
CTGTTGGTTG CAGTATTGGT GTTTGCAGTA ACCTTCTTCG TTGTTTTCAT CGAACGTGGT
CAACGTCGTA TCGTCGTTAA CTATGCGAAA CGTCAACAAG GTCGTCGTGT TTATGCAGCA
CAGAGCACAC ACTTACCGTT GAAAGTGAAC ATGGCAGGGG TTATCCCGGC AATCTTCGCT
TCCAGCATTA TTCTGTTCCC GGCCACGATT GCATCATGGT TTGGGGGCGG TACCGGTTGG
AACTGGCTGA CAACGATTTC GCTGTATTTG CAGCCAGGGC AACCGCTTTA TGTGTTACTC
TATGCGTCTG CAATCATCTT CTTCTGTTTC TTTTACACGG CGTTGGTTTT CAACCCGCGT
GAGACAGCAG ATAACCTGAA GAAGTCCGGT GCCTTCGTAC CAGGAATTCG TCCGGGAGAG
CAAACGGCGA AGTATATCGA TAAAGTAATG ACGCGTTTAA CCCTGGTGGG CGCGATGTAC
ATTACTTTCA TCTGCCTGAT CCCGGAGTTC ATGCGTGATG CAATGAAAGT ACCATTCTAC
TTTGGTGGTA CCTCGCTACT GATCGTGGTT GTCGTCATCA TGGACTTTAT GGCTCAAGTG
CAAACTCTGA TGATGTCAAG TCAGTACGAG TCTGCATTGA AGAAAGCAAA CCTGAAAGGC
TATAACCGCT AA
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| Protein sequence | MAKQPGLDFQ SAKGGLGELK RRLLFVIGAL IVFRIGSFIP IPGIDATVLA KLLEQQRGTI
IEMFNMFSGG ALSRASIFAL GIMPYISASI IIQLLTVVHP ALAEIKKEGE AGRRKISQYT
RYGTLVLAIF QSIGIATGLP NMPGMQGLVL NPGFAFYFTA VVSLVTGTMF LMWLGEQITE
RGIGNGISII IFAGIVAGLP PAVAHTIEQA RQGDLHFLLL LLVAVLVFAV TFFVVFIERG
QRRIVVNYAK RQQGRRVYAA QSTHLPLKVN MAGVIPAIFA SSIILFPATI ASWFGGGTGW
NWLTTISLYL QPGQPLYVLL YASAIIFFCF FYTALVFNPR ETADNLKKSG AFVPGIRPGE
QTAKYIDKVM TRLTLVGAMY ITFICLIPEF MRDAMKVPFY FGGTSLLIVV VVIMDFMAQV
QTLMMSSQYE SALKKANLKG YNR
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