Gene Spro_4515 details

Gene Information

• Locus tag: Spro_4515
• Symbol: mscL
• ID: 5606039
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Serratia proteamaculans 568
• Kingdom: Bacteria
• Replicon accession: NC_009832
• Strand: +
• Start bp: 5008214
• End bp: 5008630
• Gene Length: 417 bp
• Protein Length: 138 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640940082
• Product: large-conductance mechanosensitive channel
• Protein accession: YP_001480737
• Protein GI: 157372748
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1970] Large-conductance mechanosensitive channel
• TIGRFAM ID: [TIGR00220] large conductance mechanosensitive channel protein

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.00658327
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: 2
• Fosmid unclonability p-value: 0.00000531483
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGAGTATGA TGAAAGAGTT CCGCGAATTT GCCATGCGTG GCAACGTGGT TGATTTGGCA 
GTGGGTGTAA TTATTGGTGC GGCGTTTGGT AAGATCGTAT CGTCTTTCGT TGCAGATATC 
ATCATGCCAC CGCTAGGCTT GCTGATCGGT GGTGTTGATT TCAAACAATT CCACCTAGTA 
TTACGCGAAG CTCAAGGCGC GGTTCCTGCA GTAGTGATGA ACTACGGTTC ATTCATCCAA 
ACCATTTTCG ATTTCGTGAT TGTTGCCTTC GCTATTTTCC TGGCAATTAA ATTAATGAAT 
AAAGTACGCC GTAAACAGGA AGAAGCGCCG GCAGCGCCGC CTGCGCCAAC TGCAGAAGAA 
AAATTGCTGA CTGAAATTCG CGATTTACTG AGCCAACAGC AACAGCCAAA ACTATAA 

 

Protein sequence

MSMMKEFREF AMRGNVVDLA VGVIIGAAFG KIVSSFVADI IMPPLGLLIG GVDFKQFHLV 
LREAQGAVPA VVMNYGSFIQ TIFDFVIVAF AIFLAIKLMN KVRRKQEEAP AAPPAPTAEE 
KLLTEIRDLL SQQQQPKL