Gene Spro_4512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4512 
Symbolfmt 
ID5603906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5004312 
End bp5005256 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content57% 
IMG OID640940079 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_001480734 
Protein GI157372745 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.017466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000185831 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTCTGACT CTTTACGGAT TATTTTCGCC GGAACTCCAG ACTTCGCAGC GCGTCATCTT 
GACGCGCTGT TGTCATCTGG GCACCAGATT GTCGGGGTTT TCACTCAACC CGACCGCCCT
GCGGGTCGCG GCAATAAGCT GACGCCCAGC CCAGTCAAGG TTCTGGCCGA GCAGCACCAT
TTACCGGTGT TTCAGCCCAA ATCACTGCGC CCGGAAGAGA ATCAGCACCT GGTTGCCGAT
CTCAACGCCG ATGTCATGGT GGTCGTGGCT TATGGTCTGA TTCTGCCCAA AGCGGTGTTG
GATATGCCGC GACTCGGTTG CATTAACGTC CATGGTTCAC TGCTGCCTCG CTGGCGTGGA
GCCGCACCGA TCCAACGTTC ACTGTGGGCC GGCGATCATG AAACCGGCGT TACCATCATG
CAGATGGACG TGGGTTTGGA CACCGGCGAT ATGATGCACA AGATTGCCTG CCCGATCGAA
GCCGATGACA CCAGCGCCAG CCTGTACGAT AAACTGGCGC AGCTCGGCCC GCAGGGCATG
CTGACCACGT TGCAGCAGAT GGCTGCAGGT ACGGCGAAAC GTGAAGTGCA GGATGAATCG
CTGGTCACCT ATGCCGAAAA GCTGAGCAAA GAAGAAGCCC GCCTGGACTG GAACCTGCCC
GCCGTGCAGC TTGAACGCTG CGTTCGTGCC TTCAACCCGT GGCCAGTCAG TTACTTCACC
ATTGACGATC AACCGGTGAA AGTGTGGCAG GCAACGGTGC TGGCACAAAA CGCGGATGCA
GAACCTGGCA CCATCATCCA TGCCGACAAG CACGGTATTC AGGTGGCGAC CGCCGAAGGC
ATTCTTAACC TGACTCAACT GCAGCCGGCA GGCAAAAAAC CCATGTCTGC TCAGGATTTG
CTGAACTCAC GTCGTGAATG GTTTACGCCG GGCAACCGGT TATAA
 
Protein sequence
MSDSLRIIFA GTPDFAARHL DALLSSGHQI VGVFTQPDRP AGRGNKLTPS PVKVLAEQHH 
LPVFQPKSLR PEENQHLVAD LNADVMVVVA YGLILPKAVL DMPRLGCINV HGSLLPRWRG
AAPIQRSLWA GDHETGVTIM QMDVGLDTGD MMHKIACPIE ADDTSASLYD KLAQLGPQGM
LTTLQQMAAG TAKREVQDES LVTYAEKLSK EEARLDWNLP AVQLERCVRA FNPWPVSYFT
IDDQPVKVWQ ATVLAQNADA EPGTIIHADK HGIQVATAEG ILNLTQLQPA GKKPMSAQDL
LNSRREWFTP GNRL