| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4511 |
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| Symbol | def |
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| ID | 5607374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 5003785 |
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| End bp | 5004294 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640940078 |
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| Product | peptide deformylase |
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| Protein accession | YP_001480733 |
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| Protein GI | 157372744 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00434578 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000144884 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCAGTAT TGCAGGTATT ACATTACCCA GATGACCGGC TGCGCAAAGT CGCGGCCCCG
GTAAAAGAAG TCAATGCGAA TATCCAGCGC ATCGTGGATG ATATGTTTGA AACCATGTAC
GCAGAGGAAG GCATTGGCCT GGCTGCGACA CAGGTGGATA TCCATCAGCG CATTATCGTC
ATTGACGTTT CTGAGAACCG CGATCAGCGC CTGGTGCTGA TCAACCCGGA ACTGCTGGAA
AAAAGCGGTG AAACCGGGAT TGAGGAAGGC TGCCTTTCCA TTCCTGAACA ACGAGCTTTA
GTCCCGCGTG CCGCTGCTGT GAAAATCAGA GCGCTGGACC GTGACGGCAA ACCTTTTGAG
CTGGAAGCCG ACGACCTGTT GGCCATCTGT ATCCAGCACG AGATGGACCA CCTGGTAGGC
AAGCTGTTCG TCGATTACCT GTCGCCACTC AAGCGCCAGC GTATCCGTCA GAAACTGGAA
AAAATGGCCA AGCTTAACGC CCGCGCCTAA
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| Protein sequence | MSVLQVLHYP DDRLRKVAAP VKEVNANIQR IVDDMFETMY AEEGIGLAAT QVDIHQRIIV
IDVSENRDQR LVLINPELLE KSGETGIEEG CLSIPEQRAL VPRAAAVKIR ALDRDGKPFE
LEADDLLAIC IQHEMDHLVG KLFVDYLSPL KRQRIRQKLE KMAKLNARA
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