Gene Spro_4448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4448 
Symbolalr 
ID5604265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4921051 
End bp4922130 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content60% 
IMG OID640940010 
Productalanine racemase 
Protein accessionYP_001480670 
Protein GI157372681 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0787] Alanine racemase 
TIGRFAM ID[TIGR00492] alanine racemase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.418216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.575034 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCGG CAACCGCTGT AATCGACCGC CGCGCTCTGC GACATAATCT GCAACAGGTG 
CGCCGTCAGG CGCCGCAAAG TCGCCTGATT GCCGTTGTGA AAGCAAACGC TTATGGACAT
GGCCTGCTGG AAACAGCGCA CACCCTGCAA GACGCCGACT GCTACGGCGT GGCGCGCATT
GGCGAGGCAT TGATGCTGCG CTCCGGCGGT ATCGTCAAAC CGATCCTGAT GCTGGAAGGT
TTCTTCTGTG CCGAAGACCT GCCGGTGTTG GTGGCCAATA ACATCGAAAC CGCGGTGCAC
AGCATCGAAC AGCTCGAAGC GCTGGAGCAG GCCACGTTGG CGCGCCCGGT GCCGGTGTGG
ATGAAGCTCG ATACCGGCAT GCATCGCCTG GGCGTGCGCC CGGAGCAGGC GGAGGCGTTC
TATCAGCGTC TGAGCGCCTG CCGTAACGTG GTGCAGCCGG TTAATATCAT GAGCCATTTC
AGCCGCGCCG ATGAGCCTGA GTCGGACACT ACGCTCAAGC AAATACAGTG TTTCGAAAGC
TTTGCCGCCG GCAAACCGGG GCAGCGTTCG ATCGCCGCCT CCGGTGGCAC TCTGCTGTGG
CCGGATGCGC ACAACGAGTG GGTACGCCCA GGCATTATCC TGTACGGTGT TTCACCGATG
GAAGGCTCTC AGGGCTGTCA GTACGACCTG CAACCGGCGA TGACGCTTAA ATCCAACCTG
ATCGCGGTGC GTGAACACAA AGCCGGTGAA TCTGTGGGCT ACGGCGGCAC CTGGGTTAGC
GCAGGTGATA CCCGTTTGGG CGTGGTGGCA ATGGGTTATG GCGACGGCTA CCCGCGCAGC
GCACCTACGG GAACGCCTGT ATGGCTTAAC GGCCGTGAAG TGCCGATAGT GGGTCGGGTG
TCGATGGACA TGATGTCGGT CGATCTGGGG CCGGAGGCCA CCGATAAGGT TGGCGATGAA
GTGGTGCTGT GGGGCCAGGC TTTACCGGTC GAACGAATTG CCGACTGTAC CGGCATCAGC
GCTTATGAAC TGATTACCAA ACTAACGCAG CGCGTGTCGA TGGAATACAT CGGCGAATAG
 
Protein sequence
MKAATAVIDR RALRHNLQQV RRQAPQSRLI AVVKANAYGH GLLETAHTLQ DADCYGVARI 
GEALMLRSGG IVKPILMLEG FFCAEDLPVL VANNIETAVH SIEQLEALEQ ATLARPVPVW
MKLDTGMHRL GVRPEQAEAF YQRLSACRNV VQPVNIMSHF SRADEPESDT TLKQIQCFES
FAAGKPGQRS IAASGGTLLW PDAHNEWVRP GIILYGVSPM EGSQGCQYDL QPAMTLKSNL
IAVREHKAGE SVGYGGTWVS AGDTRLGVVA MGYGDGYPRS APTGTPVWLN GREVPIVGRV
SMDMMSVDLG PEATDKVGDE VVLWGQALPV ERIADCTGIS AYELITKLTQ RVSMEYIGE