Gene Spro_4409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4409 
Symbol 
ID5606788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4882251 
End bp4882739 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content54% 
IMG OID640939971 
Productrod shape-determining protein MreD 
Protein accessionYP_001480631 
Protein GI157372642 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2891] Cell shape-determining protein 
TIGRFAM ID[TIGR03426] rod shape-determining protein MreD 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000516669 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGCT ACCGCAGTAA TGGGCGCTGG ATAATCTGGC TGTCATTCCT GGTGGCGCTG 
GTGCTGCAAA TTATGCCGTG GCCGGAACAG ATCTACATGT TCCGTCCCTC CTGGCTGGCT
TTGATCCTGA TCTACTGGGT AATGGCACTG CCACACCGGG TTAACGTCGG CACCGGCTTT
GTGCTGGGGT TGATTATGGA TCTGATCCTC GGTTCTACGC TGGGTGTGCG TGCGCTGGCG
CTGGGGATCA TTGCCTATCT GGTCGCGTTT AAATTCCAAC TGTTCCGCAA CATGGCCCTC
TGGCAACAGG CGTTGATCGT CGTGCTATTG TCACTGGCGA TGGATGTTGT GGTGTTCTGG
GCCGAGTTTT TAGTGATCAA CGTTTCTTTC CGCCCAGAGG TGTTCTGGAG TAGTGTGGTA
AACGGCATTC TGTGGCCGTG GTTATTCCTG CTGATGCGCA AAATCCGCCG TCAGTTCGCC
GTACAGTAA
 
Protein sequence
MNRYRSNGRW IIWLSFLVAL VLQIMPWPEQ IYMFRPSWLA LILIYWVMAL PHRVNVGTGF 
VLGLIMDLIL GSTLGVRALA LGIIAYLVAF KFQLFRNMAL WQQALIVVLL SLAMDVVVFW
AEFLVINVSF RPEVFWSSVV NGILWPWLFL LMRKIRRQFA VQ