Gene Spro_4407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4407 
Symbol 
ID5606786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4880148 
End bp4881617 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content54% 
IMG OID640939969 
Productribonuclease G 
Protein accessionYP_001480629 
Protein GI157372640 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1530] Ribonucleases G and E 
TIGRFAM ID[TIGR00757] ribonuclease, Rne/Rng family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0408475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCTG AGCTACTGGT TAATATCACA CCGTCTGAAA CGCGGGTTGC CTATATTGAT 
GGCGGCATCC TGCAAGAGAT CCATATCGAG CGCGAATCCA AGCGCGGCAT TGTCGGCAAT
ATTTATAAAG GGCGCGTAAG TCGCGTGTTG CCGGGTATGC AGGCGGCATT CGTCGATATC
GGCCTGGACA AAGCGGCCTT CCTGCACGCC TCCGATATCA TGCCGCACAC CGAATGTGTC
GCCGGTGATG AGCAGAAAAA TTTCCACGTG CGCGATATTG CCGAGCTGGT GCGCCAGGGG
CAGGATTTGA TGGTGCAGGT GGTGAAAGAT CCGCTAGGCA CCAAAGGCGC ACGCCTGACC
ACCGACATCA CCCTGCCTTC GCGTTACCTG GTGTTCATGC CGGGGGCGGC GCACGTTGGC
GTTTCGCAGC GTATTGAAAG TGAAGCCGAG CGCGATCGCC TGAAAAAAGC CGTCGCCGGT
TACTGCGATG AACTGGGTGG TTTTATCATC CGCACTGCGG CGGAAGGCAT TGGTGAAGAA
GAGCTGTCGC AAGACGCCGC CTTCCTCAAG CGCCTGTGGA CCAAGGTGAT GGAGCGTAAA
AAACGCAACC AGACCAAATA CAAGTTGTAC GGTGAGCTGG CGCTGGCGCA GCGTATTTTG
CGTGACTTCG CCGGTGCTGC ACTGGACAGG ATCCGCGTGG ACTCGCGTCT GACCCACGAT
CTGCTGGTGG AATTTACCGG TGAGTACATC CCGGATATTA CCGCCAAGCT GGAGCTGTAC
ACCGGCAGTC AGCCGATCTT CGATCTGTAT GATGTTGAAA ACGAGATCCA GCGTGCGCTA
GAGCGTAAGG TTGAGCTGAA GTCCGGCGGC TACCTGATCA TCGACCAGAC TGAAGCGATG
ACCACCGTGG ATATCAATAC CGGCGCCTTT GTCGGCCATC GCAATCTCGA CGAAACCATC
TTCAATACCA ATATCGAAGC GACCCAGGCC ATTGCCCGCC AACTGCGGCT GCGCAATCTG
GGCGGCATTA TCATTATCGA CTTTATTGAT ATGAATAATG ACGAACATCG TCGTCGGGTG
CTGCATTCGC TGGAGCTGGC GCTGAGTAAA GATCGGGTAA AAACCACGAT CAACGGCTTC
TCTCAGCTAG GCTTAGTTGA AATGACGCGT AAACGCACGC GTGAAAGCAT TGAACATGTG
CTGTGCCATG ATTGTCCTAC TTGTCATGGA CGCGGCACCC TGAAAACTGT GGAAACCGTG
TGCTACGAAA TTTTGCGTGA AATAGTGCGC GTGCACCATG CTTATGATTC AGATCGTTTC
TTGGTTTACG CCTCTGCGGC GGTGGGTGAG GCGCTGAAAA GCGAAGAGTC CCATGCGCTG
GCCGAAGTGG AAATCTTTGT TGGCAAACAG GTCAAGGTGC AGATCGAACC CTTGTACAGC
CAGGAACAAT TTGACGTTGT CATGATGTAG
 
Protein sequence
MTAELLVNIT PSETRVAYID GGILQEIHIE RESKRGIVGN IYKGRVSRVL PGMQAAFVDI 
GLDKAAFLHA SDIMPHTECV AGDEQKNFHV RDIAELVRQG QDLMVQVVKD PLGTKGARLT
TDITLPSRYL VFMPGAAHVG VSQRIESEAE RDRLKKAVAG YCDELGGFII RTAAEGIGEE
ELSQDAAFLK RLWTKVMERK KRNQTKYKLY GELALAQRIL RDFAGAALDR IRVDSRLTHD
LLVEFTGEYI PDITAKLELY TGSQPIFDLY DVENEIQRAL ERKVELKSGG YLIIDQTEAM
TTVDINTGAF VGHRNLDETI FNTNIEATQA IARQLRLRNL GGIIIIDFID MNNDEHRRRV
LHSLELALSK DRVKTTINGF SQLGLVEMTR KRTRESIEHV LCHDCPTCHG RGTLKTVETV
CYEILREIVR VHHAYDSDRF LVYASAAVGE ALKSEESHAL AEVEIFVGKQ VKVQIEPLYS
QEQFDVVMM