| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4372 |
|---|
| Symbol | |
|---|
| ID | 5603963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 4839722 |
|---|
| End bp | 4841638 |
|---|
| Gene Length | 1917 bp |
|---|
| Protein Length | 638 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640939934 |
|---|
| Product | transcriptional antiterminator, BglG |
|---|
| Protein accession | YP_001480594 |
|---|
| Protein GI | 157372605 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG3711] Transcriptional antiterminator
[COG4668] Mannitol/fructose-specific phosphotransferase system, IIA domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.180712 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.327197 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCGAT TTCCCTACCC GCGTTTGGCC TATCTGTTTG ATGCTTTGCA GTCAGAGACT
TTGCCGCAGG AAGAGCTGGC GAAGCGCTTC GCTGTTTCCA CCCGAACCGT GCGTGCCGAC
ATCACCGCGC TGAACGATAT TCTGGAAAAC TACGGTGCCC ACTTCGTGCA TAGCCGTGGG
GCGGGTTATC GCCTGCAGGT CGATGACGCC GTACTGTTTA GCGCCATGCA ACATCAGGAA
CGTAAAAAAC ACGCCACGCC ACGCAGCGCG CAGGAACGGG TGCACTATTT GCTGATTCGT
TTTCTGACCT CAGCCTTTTC TCTGAAACTT GAAGATTTAG CCGATGAATG GTTTGTCAGC
CGTGGCACGC TGCAAAACGA CATGGCTGAG GTAAGAGAGC GTCTGGCGCA CTACCAATTG
ACCATTGAAA CCAAACCGCG CTACGGCATG AAGCTGTTTG GTTCGGAGAT GGCGATCCGC
GCCTGTCTGA CCGATCTGTT ATTCCAACTG CACCTGGCCG ATGCCGAAAA TCCGCTGCTC
AACAATGAGA TCCTGCGTCA ACCGCAGGTG ACGACCTTTG CCGGTTTGCT GCATCCGTTG
CTGTCGCAAT ATGCCATTCG TTTGACAGAC GAAGGTGAGC AGTATCTGAT TTTCTATTGT
GCAGTGGCGC TGCAACGCAT TACCGATGGT TATCCGCTGC CGGACTTTGA CGTTGAGGAC
GGGGATGACG CGGTGCGCAA GGTTTCGACC TGGCTGGCCG GGGAACTGCG TAAAGCCAGT
GGCAAAGAGA TATCGATAGC GGAAGAGGCC TACCTGCGGG TGAACATTGC TGCGCGGCGG
GTGCAGGAGG TGCAACCTAC CGAGATCAAC GCCGACGATG AAGAAGCGCT GGTGGATTAC
ATTCTGTCGT ATATCAACGC GCACTATAAC TACAATCTGC AGGGTGACAA GCAGCTGCGT
GCCGATCTGC TGACCCATAT CAAGACCATG ATCACCCGGG TGAAATACCA GATTAATATC
CCCAACCCGC TGCTGGCGAA CATTAAACAG CACTACCCAA TGGCCTATGA CGTGACGCTG
GCCGCGGTCT CCAGCTGGGG GAAATATACG CCCTACACCC TGAGTGAAAA CGAGATCGGT
TATCTGGTAC TGCACATTGG CGTTGGGCTG GAGCGGCATT ACAACATCGG CTATGAGCGA
CACCCGCAGG TGATGCTGGT GTGCGATACC GGTAACTCGA CGGTGCGGAT GATCCAGGCG
CAGATCGCAC GCAAATATCC ACAACTGGTG ATGACGCGCA TCGTTTCACT GCGAGATTAC
GAGGTGCTCA GCCATATCGA CGAAGACTTC GTTATTTCCA ATGCGCGGGT TAGCGAAAAG
AACAAGCCGG TGGTGGTGAT GTCGCCGTTC CCGACCGAAT ACCAGCTCGA ACAGCTCGGC
AAACTGGTGC TGGTGGATCG TACCAAGCCC TATATGCTGG AGAAGTTCTT CGACGCCGAG
CATTTTATGT TGGTCAATGA ACCGCTGACC CAGGCGGAAT TATTCCAGCA GGTGTGCCGC
CAGCTTGAGC AAGAAGGCTA TGTTGGCGAA GATTTTTACC CTTCAGTGGT CGAGCGCGAG
GCGATTGTTT CTACCCTGCT GGGTGAAGGG ATTGCGCTGC CGCACTCGCT GGGGTTGCTG
GCGAAAAAAA CCGTCGTGGT GACGCTGCTG GCGCCACAGG GGGTGGCCTG GGGTGAAGGT
GAAATTGCCC ACGTGATTTT CCTGCTGGCG ATCAGCAAGA GCGATTACGA AGAGGCGATG
GCAATCTACG ATCTGTTCGT CACCTTTGTG CGCGAACGTT CGATGAGTCG CCTGTTGGGC
AGTGATAATT TCGACAGTTT CAAGGCGGTG GCGCTGGACT GTTTAAGTAG GATCTAG
|
|---|
| Protein sequence | MVRFPYPRLA YLFDALQSET LPQEELAKRF AVSTRTVRAD ITALNDILEN YGAHFVHSRG
AGYRLQVDDA VLFSAMQHQE RKKHATPRSA QERVHYLLIR FLTSAFSLKL EDLADEWFVS
RGTLQNDMAE VRERLAHYQL TIETKPRYGM KLFGSEMAIR ACLTDLLFQL HLADAENPLL
NNEILRQPQV TTFAGLLHPL LSQYAIRLTD EGEQYLIFYC AVALQRITDG YPLPDFDVED
GDDAVRKVST WLAGELRKAS GKEISIAEEA YLRVNIAARR VQEVQPTEIN ADDEEALVDY
ILSYINAHYN YNLQGDKQLR ADLLTHIKTM ITRVKYQINI PNPLLANIKQ HYPMAYDVTL
AAVSSWGKYT PYTLSENEIG YLVLHIGVGL ERHYNIGYER HPQVMLVCDT GNSTVRMIQA
QIARKYPQLV MTRIVSLRDY EVLSHIDEDF VISNARVSEK NKPVVVMSPF PTEYQLEQLG
KLVLVDRTKP YMLEKFFDAE HFMLVNEPLT QAELFQQVCR QLEQEGYVGE DFYPSVVERE
AIVSTLLGEG IALPHSLGLL AKKTVVVTLL APQGVAWGEG EIAHVIFLLA ISKSDYEEAM
AIYDLFVTFV RERSMSRLLG SDNFDSFKAV ALDCLSRI
|
|---|
| |