Gene Spro_4369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4369 
Symbol 
ID5604051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4837950 
End bp4838411 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content53% 
IMG OID640939931 
ProductPTS system transporter subunit IIA-like nitrogen-regulatory protein PtsN 
Protein accessionYP_001480591 
Protein GI157372602 
COG category[G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 
TIGRFAM ID[TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.555958 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.708536 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAACG AAACAATGCA ATTAAGCTCG GTGTTAAACA TCGAGTGCAC CAGAAGCTCC 
GTCCATTGCA CCAGCAAGAA ACGGGCTTTG GAAATTATCA GCGAACTGGC CGCAAAACAG
CTCAACCTGT CATCACAGGT AGTGTTTGAC GCGGTTCTCA CCCGCGAGCG CATGGGCAGT
ACCGGTATCG GCAATGGTAT CGCTATTCCC CACGGCAAAC TGGAAGAGGA CACACTGCGG
GCCGTTGGCG TGTTTATCCG TCTCGACCAA CCTATCGCCT TTGACGCCAT TGATAACCAG
CCGGTCGATC TGCTGTTTGC CTTACTGGTA CCTGCCGACC AATGTAAAAC CCATTTGCAT
ACTCTGTCGC TGGTCGCCAA ACGCCTGGCC GACAAAACCG TATGCCGCCG CCTGCGTGCG
GCGCAAAGTG ACGAAGAGCT TTACCAAATC ATCACCGAGT AA
 
Protein sequence
MNNETMQLSS VLNIECTRSS VHCTSKKRAL EIISELAAKQ LNLSSQVVFD AVLTRERMGS 
TGIGNGIAIP HGKLEEDTLR AVGVFIRLDQ PIAFDAIDNQ PVDLLFALLV PADQCKTHLH
TLSLVAKRLA DKTVCRRLRA AQSDEELYQI ITE