| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4367 |
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| Symbol | |
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| ID | 5604277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 4836042 |
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| End bp | 4837475 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640939929 |
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| Product | RNA polymerase factor sigma-54 |
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| Protein accession | YP_001480589 |
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| Protein GI | 157372600 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0828271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.598436 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAAG GTTTGCAACT CAGGTTTAGC CAACAACTGG CCATGACCCC CCAGCTCCAG
CAGGCTATCC GCCTGCTGCA GTTGTCCACG CTTGAGCTCC AGCAGGAGAT ACAGCTGGCG
TTAGAGAGCA ACCCATTGCT TGAACAGAGC GACCTGCACG AAGAAGTCGA CGCCAAAGAA
ACTGTCGAAA CCGAAGGTTT GGATACCCGC GAGGCGTTGG AACAAAAGGA CATGCCCGAA
GAGCTGCCGC TCGACGCCAC CTGGGACGAA ATCTATACCG CCGGTACGCC GTCCGGTACC
CGCACCGATT ACAGTGACGA TGAGCTACCG GTTTATCAGG GCGAGACCAC CCAGACCCTG
CAGGATTACC TGATGTGGCA AGTGGATCTG ACGCCGTTTT CTGATACCGA TGCCGCTATT
GCCACCTCAA TCGTCGACGC CGTTGACGAC ACCGGCTATC TCACCGTGCC GCTGGAAGAC
ATTCTGGAGA GTCTGGGTGA CGATAATGTG ACAATGGACG AAGTCGAAGC GGTATTGAAG
CGCGTACAGC GTTTTGATCC GGTTGGCGTC GCCGCGCGCG ACCTGCGCGA TTGTCTGCTG
GTTCAGCTTT CCCAGTACGC TAAAGACACG CCCTATCTGG CTGAGGCACG CCTGATCATC
AGCGAGCATC TGGACCTGCT GGCTAACCAC GACTTTCGCA GCCTGATGCG AACAACGCGC
TCAAAAGAAG ATACACTGAA AGAAGCGATG TTGCTGATCC AGTCATTGGA TCCCCGTCCG
GGTCAGTCGA TCAACACCGG CGAATCCGAG TATGTGATCC CGGACGTGCT GGTGCGCAAA
GTGCAGGATG TCTGGACGGT CGAGCTCAAT AGCGACAGCA TTCCACGCTT GAAGATCAAC
CAGCAGTACG CCGCGATGGG CAATAGCGCA CGTAACGACA GTGACGGGCA GTACATCCGC
AGCAATTTGC AGGAAGCGAA ATGGCTGATC AAAAGTCTGG AAAGCCGAAA CGACACTCTG
CTGAAAGTTT CGCGCTGCAT CGTCGAGCAG CAACAGGCGT TCTTTGAACA GGGCACAGAA
TTTATGAAGC CCATGGTGCT GGCAGATATT GCCCAGGCCG TGGAGATGCA TGAATCGACA
ATTTCACGCG TGACCACGCA GAAGTTTTTG CACAGTCCGC GCGGCATTTT CGAATTGAAA
TATTTCTTCT CCAGCCATGT GAATACCGAC AGCGGGGGCG AAGCCTCCTC TACGGCGATC
CGGGCAGTGG TCAAGAAAAT GATCGCGGCG GAAAACCCCG CCAAACCGCT CAGCGACAGC
AAGCTGGCCA CCCTGCTCTC CGACCAGGGG ATCATCGTGG CACGGCGTAC CGTCGCCAAG
TACCGAGAGT CTTTGTCCAT CCCGCCGTCC AACCAACGTA AACAGTTGGT TTGA
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| Protein sequence | MKQGLQLRFS QQLAMTPQLQ QAIRLLQLST LELQQEIQLA LESNPLLEQS DLHEEVDAKE
TVETEGLDTR EALEQKDMPE ELPLDATWDE IYTAGTPSGT RTDYSDDELP VYQGETTQTL
QDYLMWQVDL TPFSDTDAAI ATSIVDAVDD TGYLTVPLED ILESLGDDNV TMDEVEAVLK
RVQRFDPVGV AARDLRDCLL VQLSQYAKDT PYLAEARLII SEHLDLLANH DFRSLMRTTR
SKEDTLKEAM LLIQSLDPRP GQSINTGESE YVIPDVLVRK VQDVWTVELN SDSIPRLKIN
QQYAAMGNSA RNDSDGQYIR SNLQEAKWLI KSLESRNDTL LKVSRCIVEQ QQAFFEQGTE
FMKPMVLADI AQAVEMHEST ISRVTTQKFL HSPRGIFELK YFFSSHVNTD SGGEASSTAI
RAVVKKMIAA ENPAKPLSDS KLATLLSDQG IIVARRTVAK YRESLSIPPS NQRKQLV
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