Gene Spro_4341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4341 
Symbol 
ID5605207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4808392 
End bp4809045 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content54% 
IMG OID640939903 
Productisoprenoid biosynthesis protein with amidotransferase-like domain 
Protein accessionYP_001480563 
Protein GI157372574 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3155] Uncharacterized protein involved in an early stage of isoprenoid biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.293194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.124314 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACG TTGGCGTAGT GCTGAGTGGC TGTGGGGTTT ATGACGGTTC GGAGATCCAT 
GAAGCCGTCC TGACGCTGCT GGCGTTGGAC CGGGCGGGGG CGCAGGCGGT GTGTTTTGCC
CCGGATACAC CTCAACTTCA TGTTATCAAT CATTTATCTG GCGATGTAGT GCCGGAAAAT
CGCAATGTTT TAGTGGAGTC TGCGCGCATT GCCAGAGGCA GGGTTCAGCC GCTTTCGCAG
GCTGACGCCA GCCAACTCGA CGCCCTGATC GTCCCCGGCG GCTTTGGTGC GGCAAAGAAC
CTCAGCAGTT TTGCCAGCGA AGGGGCGGAA TGCTGGATTG ATAAGGATTT GGCTAAGTTA
ACGCAGCAAA TGCATAAGGC AAATAAACCA ATTGGTTTTA TGTGTATTGC GCCTGCCTTG
CTGCCGAAGT TGCTGGATCA ACAAGTGCGG CTGACCATTG GCAACGATCC CGACCTGGGT
GAAGTGATTG ATGCCATGGG CGGCGAGCCG GTGATTTGTC CGGTTGACGA CATCGTAGTG
GATATCGAGA ACAAAGTGGT GACTACGCCG GCCTATATGC TGGCGAAATC GATCGCTGAG
GCGGCCAGCG GAATTGATAA GCTGGTTTCA CGGGTGCTGG ATTTGACTGA ATGA
 
Protein sequence
MKNVGVVLSG CGVYDGSEIH EAVLTLLALD RAGAQAVCFA PDTPQLHVIN HLSGDVVPEN 
RNVLVESARI ARGRVQPLSQ ADASQLDALI VPGGFGAAKN LSSFASEGAE CWIDKDLAKL
TQQMHKANKP IGFMCIAPAL LPKLLDQQVR LTIGNDPDLG EVIDAMGGEP VICPVDDIVV
DIENKVVTTP AYMLAKSIAE AASGIDKLVS RVLDLTE