| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4339 |
|---|
| Symbol | |
|---|
| ID | 5605638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 4807008 |
|---|
| End bp | 4807583 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640939901 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001480561 |
|---|
| Protein GI | 157372572 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.135394 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTGA AAGCCACATT TGCAGTGCTG TCCAGCGCCC TGCTGTTACA AGGCTGTATT
GCAGGCGTTG TCGTTGGCAG CGCCGCCGTT GCCACCAAAA CGGCCACCGA CCCACGTAGC
GTCGGGACTC AGGTAGACGA CGGCACGCTG GAAGCCCGGG TTGAAAACGC CCTGAGTAAA
GATCAGCAGT TGAAGAAAGA GGCCCGGGTG GTTGCGACCG CCTATCAGGG TAAGGTGCTG
CTGACCGGCC AGGCGCCGAA TACCGATCTG GCCGCCCGCG CCAAGCAAAT CGCGATGGGT
GTTGAAGGCA CTACCGAAGT GTATAACGAG GTCCGTCAGG GTACGCCGGT CAGTCTGAGC
ACCGCGTCTT CCGACACCTG GATCACCACC AAGGTGCGTT CACAATTGCT CACCAGCGAT
GCAGTGAAGT CATCCAATGT GAAAGTCACC ACCGAAAATG GTGAAGTGTT CCTGCTGGGT
CTGGTCACGC AACAGGAAGC GCAGTCTGCG GCACAGACCG CCAGCCAGGT CGGTGGCGTG
AAACACGTCA CCACCGCCTT TACCTTTGTG AAATAA
|
|---|
| Protein sequence | MKLKATFAVL SSALLLQGCI AGVVVGSAAV ATKTATDPRS VGTQVDDGTL EARVENALSK
DQQLKKEARV VATAYQGKVL LTGQAPNTDL AARAKQIAMG VEGTTEVYNE VRQGTPVSLS
TASSDTWITT KVRSQLLTSD AVKSSNVKVT TENGEVFLLG LVTQQEAQSA AQTASQVGGV
KHVTTAFTFV K
|
|---|
| |