Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_4250 |
Symbol | |
ID | 5603513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 4711517 |
End bp | 4713001 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640939810 |
Product | general secretory pathway protein E |
Protein accession | YP_001480472 |
Protein GI | 157372483 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0196458 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACACAC CCTGCTTGTC TTATGCCTGG GCCCGTCAGC ATCACGCAGT ACTCACCAGC GAAGAAAACC AATACACCCT ATGGTGTCGA CAGGACGTGG GGCTGGCCAC GTTGGCCGAG CTTGCGCGTC TGCTGGAGGC CGACATTCCG CTGTGTTTGC TGGACGAAAA TGCCTTTGAG CAGAAGTTGC TGGAACATTA CCAACAGGGC AACAGCAATA CGCAAAAGAC CATGGACGAC CTGGGTAAGG AGCTTGATTT CTACAGCCTG GCGCAGGCGC TGCCGGCCAC CCAGGATCTG CTTGATGAAC AGGACGATGC GCCGATTATC CGTTTGCTTA ATGCGATGCT CAGTGAAGCC ATTAAAGAGC GGGCCTCAGA TATTCATATC GAGACCTATG ACAGCGAACT GGTGATCCGC TTTCGTATTG ATGGGGTGCT GAAAACCATT CTGACTCCCC AGCATCAACT GGCGGCCTTG CTGACATCTC GCATTAAGGT GATGTCCAAA CTGGACATTG CCGAGAAGCG CATCCCGCAG GATGGCCGCA TCACGTTGAA GATTGGCGGC CGAGCCGTCG ATGTGCGGGT GTCCGTACTT CCGACCAATC ATGGTGAGCG GGTGGTGATG CGTCTGCTGG ATAAAAGCAG CGTCAGTCTG GATCTCGCCA GGATGGGCAT ACGCTCGGTG GAGTTCGCGG CGCTGACGCG ACTGGTTCAT CAGCCCCATG GGGTGATCCT GGTGACCGGC CCGACCGGCT CGGGCAAAAG CACCACGCTT TATGCGTTAC TGATGCAGAT TAATGACGGC AATCGCAACA TCATGACCAT AGAAGACCCG GTGGAGTTTG AATTAAAGGG CATTTCGCAA ACCCAGGTCA ACACGCGGGT CGATATGACG TTTGCCCGCG GGTTACGCGC CCTGCTGCGG CAAGATCCGG ATGTGGTGTT GCTGGGCGAA ATACGCGATA CCGAAACCGC ACATATCGCC GTACAGGCTT CACTGACCGG GCACTTGGTG TTGTCCACGC TGCATACCAA TACCGCCATC GGCGCCATCA CCCGCCTGCG CGATATGGGG ATCGAACCCT TCCTGCTGGC CAGTTCGCTG ACGGGCATTC TCGCTCAGCG GCTGGTGCGA AAACTGTGCC CGCATTGCCG CCAGGCCTAT GTGCTTTCTG CAGAGCAAGC GCTCTCGCTA CAGCTCTCTG TCGAGATTGA GCAGGTCGCG TGGCGTCCGA TCGGCTGTGA AAAATGCAAT GGCCTGGGCT ACCGTGGGCG TCTGGGGATC CATGAACTGC TGCTGATTGA TGACGCCATC CGCAAAGCCA TTCATTTGGG CAGCAGTGAG CAGGAGATAG AACAATTGTG CGGCCATGCG CGACACACCC TGCGGCAAGA TGGTGCGCGC AAACTGCTGA CCGGTGAAAC CAGTATTGAG GAAGTTCTGC GGGTCACCGG GGGGGATCAT TGCGGTGAAG TTTAA
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Protein sequence | MNTPCLSYAW ARQHHAVLTS EENQYTLWCR QDVGLATLAE LARLLEADIP LCLLDENAFE QKLLEHYQQG NSNTQKTMDD LGKELDFYSL AQALPATQDL LDEQDDAPII RLLNAMLSEA IKERASDIHI ETYDSELVIR FRIDGVLKTI LTPQHQLAAL LTSRIKVMSK LDIAEKRIPQ DGRITLKIGG RAVDVRVSVL PTNHGERVVM RLLDKSSVSL DLARMGIRSV EFAALTRLVH QPHGVILVTG PTGSGKSTTL YALLMQINDG NRNIMTIEDP VEFELKGISQ TQVNTRVDMT FARGLRALLR QDPDVVLLGE IRDTETAHIA VQASLTGHLV LSTLHTNTAI GAITRLRDMG IEPFLLASSL TGILAQRLVR KLCPHCRQAY VLSAEQALSL QLSVEIEQVA WRPIGCEKCN GLGYRGRLGI HELLLIDDAI RKAIHLGSSE QEIEQLCGHA RHTLRQDGAR KLLTGETSIE EVLRVTGGDH CGEV
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