| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4207 |
|---|
| Symbol | |
|---|
| ID | 5604546 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 4665518 |
|---|
| End bp | 4666561 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640939767 |
|---|
| Product | LacI family transcription regulator |
|---|
| Protein accession | YP_001480429 |
|---|
| Protein GI | 157372440 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR02417] D-fructose-responsive transcription factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTCAG TGAAAAAAAA TAAACGCATT ACCATCAGTG ATATTGCCGC ACTGGCCGGC
GTGTCGAAAT CGACCGCCAG CCTGGTGCTT AACGGTCGCA GCAAGGAATA TCGGGTGTCC
GACGACACCC GCGATCGCAT CCTGGCACTG GCCGGTGAGC ACCACTACCA GCCCAGCTTC
CACGCCCGTT CACTGCGTTC TTCCCGCAGC CATACCCTGG GGCTGGTGGT GCCGGAAATG
ACCAACTACG GTTTTGCGGT GATTTCACGC GAGCTGGAAA CCCTGTGCCG CGAGGCCGGT
TTGCAGTTGC TGATCGCCTG TACCGATGAA AACCCGGCGC AGGAAATGAT GGCGGTGAAC
AGTCTGGTAC AACGTCAGGT CGACGGTCTG ATTGTCGCCT CCAGCCAGCT TAACGATGCG
GAATACCAAA AGATTAACGC CGGCCTGCCG GTGGTGCAGA TGGACCGGCT GATCGTCGGC
TCCGACCTGC CGCTGGTGAT CACCGACTCG CTGACCTCGA CCGCCACGCT GGTGGAAAAC
GTCGCGCGTC AGCATCCGGA CGAATTCTAT TTCCTTGGCG GCCAACCCCG CATTTCACCC
ACGCGCGATC GGCTGGCCGG TTTCCAACTC GGTCTGGAAC GTGCCGGGGT GGTGTGTAAA
CCGGAATGGA TCATCAACGG TAATTATCAC CCCAGTTCCG GCTACGAGAT GTTCGCCCAA
CTCTGTGCGC AACTGGGCCG ACCGCCCAAG GCGCTGTTTA CCGCCGCCTG CGGCCTGCTG
GAAGGGGTGC TGCGCTACCT GAATCAGCAC CAGTTGATGG AGAGCGATCT GCATCTGTGC
AGCTTTGACG ACCACTACCT GTTCGACGGA CTAACGCTGA AAATCGACAC CGTGGCGCAA
GACTGCCGCG CCCTGGCCCA ACACAGCTTC GACATGGTTA GCGCGCTGAT TGACGAGCGG
CCATTAGAGC AGAACGCGCT ATACCTGCCG GGCAGCATCC ACTGGCGCCA CGCCGGTTCG
AAGGCATTGC TCGGTCAGCC TTAG
|
|---|
| Protein sequence | MPSVKKNKRI TISDIAALAG VSKSTASLVL NGRSKEYRVS DDTRDRILAL AGEHHYQPSF
HARSLRSSRS HTLGLVVPEM TNYGFAVISR ELETLCREAG LQLLIACTDE NPAQEMMAVN
SLVQRQVDGL IVASSQLNDA EYQKINAGLP VVQMDRLIVG SDLPLVITDS LTSTATLVEN
VARQHPDEFY FLGGQPRISP TRDRLAGFQL GLERAGVVCK PEWIINGNYH PSSGYEMFAQ
LCAQLGRPPK ALFTAACGLL EGVLRYLNQH QLMESDLHLC SFDDHYLFDG LTLKIDTVAQ
DCRALAQHSF DMVSALIDER PLEQNALYLP GSIHWRHAGS KALLGQP
|
|---|
| |