| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4187 |
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| Symbol | |
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| ID | 5605186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | - |
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| Start bp | 4638808 |
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| End bp | 4641117 |
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| Gene Length | 2310 bp |
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| Protein Length | 769 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640939747 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_001480409 |
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| Protein GI | 157372420 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGACC GTATCACGGC AACAACGCCT GCGGGTGAGG GAACGCTGAA GTTCTGGAAA
CTTAGCGGAG AGGAAGTGGT TTCACGCTCA TTTGAATTGA GCGTGACGAT GCTCAGCACC
AACGCCCGCC TGGACCGCAG GGCCATGCTT GGCCAGCCGA TTACCCTGAC TATCCCTACT
CAGGGGCTGC TTGCTGCGCC ACGCTATCTC AACGGAAAAA TCACCAGGGT CAACGTTCAT
AGTGCGGATA TTAATGGTGA GCGCTACGTG GTTTACACGC TGACCATGGA GTCGGACCTG
TGGCCGCTGA AGCGGGACCG CAACCAACGT ATATTCCAGA ACCAGCGGGT GCCGGACATC
ATCAAAACGG TGCTCGACGA ATATGGCGTG CAGATGGAGA ACCAGCTCAC CGGTAGCTAC
CGCAATTGGG AATATTGCGT GCAGTACCAG GAGAGCAGCT ACGACTTTAT TTCGCGCCTA
ATGGAGCTGG AAGGCATTTA TTTCTTTTTC CGCCACGAGT CGGGTAAACA CACCATGGTG
CTGTACGACG CCTCTCAGCA GCACCAGCCG TTTAGCGGTT ATGAGGCCAT TCACTACCAC
GCCACGCCTT CCGGTGGCAG CACCAGCGAA GAGGGGATCG GCCAGTGGGC GATATCCGAG
CGGGTGACGC CGGGGATCTA CAGCATCGAC GACTACGATT TCCGCAAGCC CAACGCATGG
CTGTTCCAGG CGCGACAGAA CCCAACCTCA CCCTCACCGG GCCAGATTGA CTACTACGAC
TGGCCGGGGC ACTTCGTGGA GCACAGCCAC GGCGAAACCT ACGCCCGGGT GCGCCAGGAG
GAGTGGCAGG CGGAGCATCA GCGCATCGAC GCAACGGCTA CCGCGCTGGG TATCGTACCG
GGGTGTACCT TTGCCCTGCT CAACCCGCCG TTTGCCAGTG ACGGTGGAGA GTATCTGGTG
CTGAGTGCGC GTTACGATTT TGAAGAGAAC AGCTACGCCA GCGGGGGTGA AGAGGCGGTG
CATCGCACCG ATTTTGTGGT GATCCCGGCG AGCACGCCGT TCCGCTCAGC GCAGCGTACC
CCGTGGCCGC GGACTCATGG CCCGCAAACG GCCCGGGTGG TGGGGCCGCA GGGGGAGTCT
ATCTGGACCG ATAAATACGG TCGGGTGAAG GTGAAATTCC ACTGGGATCG TCTGGCGAAA
GGGGATGAAA GCAGCTCCTG CTGGGTGCGA GTGTCCAGCG CCTGGGCAGG CCAGGGCTTC
GGCGGCGTGC AGATCCCGCG AGTGGGGGAT GAAGTGGTGA TTGATTTTAT CAATGGCGAT
CCGGACCGCC CGATGGTCAC CGGTCGGGTG TATAACGAAG CCTGTATGCC GCCGTGGACG
CTGCCAGCCG GTGCGACCAT GATGGGCTTT ATGACGCGCT CCAAAGACGG CCACAGTGAC
AATTCCAGCC ACCTGTTCTT CGAAGATAAG GCGGGCTCGG AGATGGTGCA GCTGCATGCC
GAAAAAGATA TGAATATTTC GGTGGAGAAC GATAAAACGG TGACCGTGGA CGGCAATCGC
ACCACCACCA TTCAAAAAGA TCAGAAGGAT GAGGTGTTCG GTAACGCTAT CTTCCAATTC
CACGGTATGC GCACCACGAC GGTCGACAAA CCGGAAACCA AAACCTTTAA GGACGGCGAA
AAGGTCACTA TCACCAATGG CCGGACGTCG GATATTACCA GCGGCGGAGA AACGCTAACC
ATTAAGGGAA AGCGGAGCAT CGATACGGAC GGTACAGAAA ATCAACATGT TACCGGCAAG
GTAACCCGCA CCTATGACGC AGGCATGGAC TCCTTCCTCA CCGGGGATCG CTATGACAAG
GTCACGGGGA AACGCCATAA TATCGTCACC CAGGACGTTA CTGACGAAAT CCAGGGGGGA
CGGGTACAAA CCATCACCAA GGATGCCAAG ACGGACATCC TGGGCAGTTG GAAGCAGACG
GTGCAAGGCG GGGTATCCAT CACCTCACCG AAAATGATCA CCATCGACAG TGCGGAAAAA
GTGAGCATCA AGACGCCGCA TGCTTTTGAA TACAAAGATC ATAAAGAGTC CGCTTCCATG
TTTTCCTTTG ATTTCACGGC GGCGAAAATT GTTACGGAAG GCTATTCTAT GAGCGTGACT
GCGAGCGGCA AGCTCGGGTT GACCAATATG AAATTTGATA AGACAGCCTT TGATCTTACC
ACCACCGAGG GGCGTGTGGC TTTTATCGAT GCGATGGCTC ATGTCGGGAA GATAATGTCA
TCATTTAACG GTCTGACCAT GTTCGGCTAA
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| Protein sequence | MFDRITATTP AGEGTLKFWK LSGEEVVSRS FELSVTMLST NARLDRRAML GQPITLTIPT
QGLLAAPRYL NGKITRVNVH SADINGERYV VYTLTMESDL WPLKRDRNQR IFQNQRVPDI
IKTVLDEYGV QMENQLTGSY RNWEYCVQYQ ESSYDFISRL MELEGIYFFF RHESGKHTMV
LYDASQQHQP FSGYEAIHYH ATPSGGSTSE EGIGQWAISE RVTPGIYSID DYDFRKPNAW
LFQARQNPTS PSPGQIDYYD WPGHFVEHSH GETYARVRQE EWQAEHQRID ATATALGIVP
GCTFALLNPP FASDGGEYLV LSARYDFEEN SYASGGEEAV HRTDFVVIPA STPFRSAQRT
PWPRTHGPQT ARVVGPQGES IWTDKYGRVK VKFHWDRLAK GDESSSCWVR VSSAWAGQGF
GGVQIPRVGD EVVIDFINGD PDRPMVTGRV YNEACMPPWT LPAGATMMGF MTRSKDGHSD
NSSHLFFEDK AGSEMVQLHA EKDMNISVEN DKTVTVDGNR TTTIQKDQKD EVFGNAIFQF
HGMRTTTVDK PETKTFKDGE KVTITNGRTS DITSGGETLT IKGKRSIDTD GTENQHVTGK
VTRTYDAGMD SFLTGDRYDK VTGKRHNIVT QDVTDEIQGG RVQTITKDAK TDILGSWKQT
VQGGVSITSP KMITIDSAEK VSIKTPHAFE YKDHKESASM FSFDFTAAKI VTEGYSMSVT
ASGKLGLTNM KFDKTAFDLT TTEGRVAFID AMAHVGKIMS SFNGLTMFG
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