| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4131 |
|---|
| Symbol | |
|---|
| ID | 5602940 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 4586110 |
|---|
| End bp | 4586943 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640939691 |
|---|
| Product | ThiJ/PfpI domain-containing protein |
|---|
| Protein accession | YP_001480353 |
|---|
| Protein GI | 157372364 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAGGC GCGATTTTAT CGTAAAGACA ATATTGGCAA CCGCTACCCT TGCTGCAACC
TACAGTTCAC AGGGAATATC TTCAACTACT ATGGTCACCC CCAACTCCGG AGCTGAAAAG
AAAAAAGACC CTAATGCTAA AACCATTGCC TTCGTCCTAT TCCCGAATAT GACACCCTTG
GATATCGTTG GACCTGTCAC TATGCTCCAA AACCATGGTT TCAACGTTGA GTACGTCTAC
CATGATAAAA ACCCAGTACC GACAGAAATA AACTCCCTAT CATTGATGCC TACAGCCACT
TTTTCGGAGT TAAACTCAGC CGATATCCTT TGCGTGACAG GCACACACAA TCCTTTTAAT
GCTATCGCTG ATAAAAAAAT GCTGGATTGG ATCAATACCG TTGGTAAGCG TGCAGAGTAC
GTCACTAGCG TATGTACTGG CGGCATTATT ATTGCCGCCG CTGGTTTGCT TGATGGCTAT
AAGGCCTCAA CTCACTGGAG CTTTCAAGAC ACATTGGCAG CATTGGGGGC AACCCCTTCA
GATGAACGCG TTACTGTTGA TCGGAACAGA ATCACCGGTG GCGGAGTGAC AGCCGGCATT
GATTTTGGCC TGTATTTACT TTCTTTATTA AAAGGAAAAA CTACCGCTGA GTTAATGCAG
CTATTTATCC AATATGATCC CCACCCTCCA TTCAACGCTG GCACCCCACA GCTGGCGGGC
CAAAAACTCA CTGACCAGGC GAAAGAAATG ACAGCAGCCT ATCTGGCCAA AGAAACACCC
AACTATAAAG AAACTCTGAC TGAGGCAATT GATTATAAAA ACAAATATAT CTAA
|
|---|
| Protein sequence | MERRDFIVKT ILATATLAAT YSSQGISSTT MVTPNSGAEK KKDPNAKTIA FVLFPNMTPL
DIVGPVTMLQ NHGFNVEYVY HDKNPVPTEI NSLSLMPTAT FSELNSADIL CVTGTHNPFN
AIADKKMLDW INTVGKRAEY VTSVCTGGII IAAAGLLDGY KASTHWSFQD TLAALGATPS
DERVTVDRNR ITGGGVTAGI DFGLYLLSLL KGKTTAELMQ LFIQYDPHPP FNAGTPQLAG
QKLTDQAKEM TAAYLAKETP NYKETLTEAI DYKNKYI
|
|---|
| |