| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4054 |
|---|
| Symbol | |
|---|
| ID | 5602875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 4494141 |
|---|
| End bp | 4495784 |
|---|
| Gene Length | 1644 bp |
|---|
| Protein Length | 547 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640939615 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_001480277 |
|---|
| Protein GI | 157372288 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATGAAC AGTATTTTTC CACAAGCCAT AATATTAACT CAGCTGGTCC ACAAGAAAAC
TATGCGTGGG CTATAGCTAA ATTCACGATC AGGCTGGCAG GATTTAATGC GAATATTGAG
CGTCAGTTAC GCCTGGGAAA CTCTGATAAA GAAGAATTAC AAACTGAGCT TGATCTCCTG
TTCTCGAGCT CGAATGTTCT GCTACATAAA AGTGTATCAA CCAGATACTT ATTTGAAGAG
GCAGGATACG CTACGACTGT AGCACATATA AATGAAAATC TGGAAAAGAT TGATGTCGAG
CTAAATAAAG AGGTTCCTGA TTACTCTATC ATTCTTAAAA GCATTGAATT AATTGGACAA
GACAATAAAA GTCTCGTTGT AATTTCAGAC CATGCCGAAG TAAGGCAACG AAATATTATC
CAACAAGACT ACATTAACAA AGGAAACTCC ATGAAGTTTC CAATTGCGTC ACTGTACTTC
CTATTCCTAT TGATGCTATT TATTTCATAT CGACAAGTGA AATCCATTAA CAACCAATTA
GAATCCGAAA AAAAGTCCTT CAACAACAAA AACGCATTCC TTGGGATTTT GGGTCACGAA
TTAAGAACTT CACTCCAGGC AATAATTTCC TCCGTAGAGG TCATTATACG AAAAAAAGAT
GACACGACAT TCAACCATTT TGAACGTTTG GAAAATGCCG CCATGAAAAT GGAACGTCAG
ATGAAAGACC TTGCTGAATT TGCAAAGGTT GATAATGGTA ACGTCGAAAT AAAAATAGCA
TCATTCAACT TACGTAAAAT TGTGCAAGAT ACCGTTGAGC AAAGCATTTC GATATTAAAT
AAAAACTCTG TTTCTGTAAG TTTAGGTGAC ATCTCTGATG TGTATATAAA GACTGATCCC
TCGCGGACTA TGCAAATAGT TGAAAACATT GTCACCAATG CCATCAAATA CACAGAAAAC
GGTAATGTGC AGGTCAGTGC AGTTGTTCAC GAAAAATCCA AACTAATTAT TAAGGTCGAA
GATTCGGGGC AGGGTATCCC GAAAGATAAA ATAGACACTA TATTTTCGCC GTTTATCCGC
GTCGGCAACG ACAACAAGGT GCCCGGTTTT GGGATGGGGT TAGCTATCGT CCATGGTGTT
GTTAAAGCCA TGAATGGGAC TATTGATGTA AAAAGTGATG TTGGTAAAGG AACTGTATTT
ACCGTTTCAT TACCTATTGA GCTGGCAACA CCTGCTGAAA TTGACATTAT CACCTATATT
GATGACAAAC CGTTCTCAGC TAAGGGCATC AGTATATTAA TTATTGATGA TAATGAAATG
GCGTGCGAGT CATTAGTATC AATTCTTCAG CATGACTTTT CAGTAGAGTA TACAACATCT
CCGGAAAGAG CATTGGAGAA GTTATATCGG AAATCATTTG ATCTTGTTTT GAGTGATTTA
CAGATGCCTA TTATCACTGG TGATGACTTA TACAGAGAAG TCAAACAGAA CAACGGCCCA
AATAAAAACA CACCGTTTAT ATTCATTAGT GCATACACCA GTGAAAGCCC AATCAAAGAT
GTGGATATTT TAACAAAGCC AGTAAGATTA AATGATATTA AAAAATCCAT AGAATCCGTA
TTTGCGAGTC AACCCACTCT ATAA
|
|---|
| Protein sequence | MYEQYFSTSH NINSAGPQEN YAWAIAKFTI RLAGFNANIE RQLRLGNSDK EELQTELDLL
FSSSNVLLHK SVSTRYLFEE AGYATTVAHI NENLEKIDVE LNKEVPDYSI ILKSIELIGQ
DNKSLVVISD HAEVRQRNII QQDYINKGNS MKFPIASLYF LFLLMLFISY RQVKSINNQL
ESEKKSFNNK NAFLGILGHE LRTSLQAIIS SVEVIIRKKD DTTFNHFERL ENAAMKMERQ
MKDLAEFAKV DNGNVEIKIA SFNLRKIVQD TVEQSISILN KNSVSVSLGD ISDVYIKTDP
SRTMQIVENI VTNAIKYTEN GNVQVSAVVH EKSKLIIKVE DSGQGIPKDK IDTIFSPFIR
VGNDNKVPGF GMGLAIVHGV VKAMNGTIDV KSDVGKGTVF TVSLPIELAT PAEIDIITYI
DDKPFSAKGI SILIIDDNEM ACESLVSILQ HDFSVEYTTS PERALEKLYR KSFDLVLSDL
QMPIITGDDL YREVKQNNGP NKNTPFIFIS AYTSESPIKD VDILTKPVRL NDIKKSIESV
FASQPTL
|
|---|
| |