Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_4048 |
Symbol | |
ID | 5606658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 4486861 |
End bp | 4487892 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640939609 |
Product | integrase family protein |
Protein accession | YP_001480271 |
Protein GI | 157372282 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.900099 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAACG AAGAAAAGAT GCACGACGAG TGGGAATTGC TGCTCGAGGA ATATTTCTTT ACTAAGCAAC TTCGTTCAGC AACGGAATGG AGCTACAGGA AAGTTGCTCT GACGTTTACG CGTTTTATTG GTGGAATTAT TACCCCAGCT ATGGTGACGC AAAGGGACGT CCTGGTTTGG CGCCGACATC TGTTAAAGGA GAAAAGTCTC TCGGTGCATA CCTGGAACAA TAAGGTAGCT CACTTGCGGG CTATATTTAA CCTGGGAATT AAAAAAGGGT TAGTTCAGCA CACGGAGAAT CCCTTTAACG GAACTGTAGT CCGTTCTGAT ACCAAGAAAA AACGAATATT GACGAAGACT CAATTGACCC GCCTTTACCT CGTAATGCAG CAGTATGAAC AGAGGGAGAA AGAGAGAAAA CCAGTGAAAG GTGGGAAATG TGCTCTCTAC CCAACCTGGT TCTGGATGAC GGTATTAGAC ACATTCCGAT ATACCGGGAT GCGTAACAAT CAGATGATCC ACATCAGACT GAGAGATGTG AACCTTGAGC AAGGCTGGAT CGAGCTTCGG CTTGAAGGAA GCAAAACACA TAGAGAGTGG AAGGTACCAC TGGTTCGTCA ATTAAGAGAA CGAATAAAGC TGCTTATTAT GCGTGCTACT GAGCGAGGTG CTGGTCAGCA TGACCTGCTT TTTGACGTCA AACGGTTCAC CAACCCACGG CATACTCATT ACATCTATGA CGAAAAAAAT GTTCTGCAGT CCTTTCGTAG CTTTTATCGT CGGTTGTCGA GGGATAGTGG CTTTGATATT TCCTCACACC GTTTCCGCCA CACGCTAGCC ACGGAGCTGA TGAAATCCCC GGACAGAAAT CTAAAACTGG TGAAGGATCT GCTGGGTCAC CGTAACGTCA GTACCACAAT GGAGTATATC GAATTGGATA TGGAAGTAGC GGGGAAAGCA CTCGAACAGG AGCTTGTTTT ACATACGGAT ATCACTGCGA CGAGAAGCTT ACAAAGCTTG ACACAGGTAT GA
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Protein sequence | MKNEEKMHDE WELLLEEYFF TKQLRSATEW SYRKVALTFT RFIGGIITPA MVTQRDVLVW RRHLLKEKSL SVHTWNNKVA HLRAIFNLGI KKGLVQHTEN PFNGTVVRSD TKKKRILTKT QLTRLYLVMQ QYEQREKERK PVKGGKCALY PTWFWMTVLD TFRYTGMRNN QMIHIRLRDV NLEQGWIELR LEGSKTHREW KVPLVRQLRE RIKLLIMRAT ERGAGQHDLL FDVKRFTNPR HTHYIYDEKN VLQSFRSFYR RLSRDSGFDI SSHRFRHTLA TELMKSPDRN LKLVKDLLGH RNVSTTMEYI ELDMEVAGKA LEQELVLHTD ITATRSLQSL TQV
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