Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_4047 |
Symbol | |
ID | 5606069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 4483726 |
End bp | 4485888 |
Gene Length | 2163 bp |
Protein Length | 720 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640939607 |
Product | ornithine decarboxylase |
Protein accession | YP_001480270 |
Protein GI | 157372281 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.388924 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.452479 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGAAT TGAAAATAGC CACCAGCGCC AGTTTGGTTG CCACCATTGA AACACTGCGC CAGGTCGTCC GCATCGAGCA AACGGACTAC ACCGACGTGG CCGCGTTAGT GGTGTCGGTT GATGACGTCA ACGCAGGTCA TCTGGCGCAG CTCAAAGCGA CCGGGTTCGA AATACCGACC TTTGTGGCGG TGGCAGGGGA CGAGCACCTC TCTCCGGACT ACCTGCCGTT GATCAGCGGT GTTTTTGCGC TGGAAGGCGC CAGCAAGGCG TTCTATATGG CACAGCTCGA AGCCGCCGCC GATGCCTACG AGCAGGCTCT GCTGCCGCCG TTTTTCAAGA CGCTGAAAAC CTATGTGGAA ATGGAAAACT CAACCTTTGC CTGCCCGGGC CATCAGGGCG GCGAGTTTTT CCGCAAGCAC CCGGCCGGCC GGAAGTTTTT TGAGTTCTAC GGTGAAACGC TTTTTCGTTC TGACATGTGC AACGCCGACG TTAAGCTGGG CGATTTATTG ATCCACGAAG GCTCGGCCAA GGATGCGCAA AAGCATGCGG CCCGGGTATT CAACGCCGAT AAAACCTATT TCGTGCTTAA TGGTACCTCT GCCGCCAATA AGGTCGTGAC CAATGCTTTG CTGACCCGGG GTGATTTGGT GTTGTTCGAT CGCAACAACC ACAAGTCCAA CCACCACGGT GCACTGATCC AGGCCGGGGC AACGCCGGTC TATCTGGAAA CCGCGCGTAA CCCGTTTGGT TTCATCGGCG GCATTGATTC GCGCTGCTTT GATGAGCGTT ACCTGCGCGA GCAAATCCGC GAAGTGGCGC CTGAAAAGGC CAATGCGGCA CGTCCGTTCC GCCTGGCGAT TATTCAGCTC GGTACCTACG ACGGCACCAT CTATAACGCC CGTCAGGTGA TCGACACCAT CGGCCACCTG TGTGACTACA TTCTGTTTGA CTCTGCCTGG GTGGGGTACG AAGGTTTTAT CCCGATGCTG AAAGAGTGCT CGCCGCTGTT GCTGGAGCTG GATGAGCTGG ATCCGGGCAT CTTTGTTACT CAGTCGGTGC ATAAACAACA GGCTGGTTTC TCGCAGACTT CGCAAATCCA CAAGAAAGAC GACCACATCA AGGGCCAGAA GCGCCACTGC AACCACAAGC ACCTTAACAA TGCTTTCATG CTGCACGCCT CTACCAGCCC GTTCTATCCA CTGTTTGCCG CGCTGGACGT TAACGCCAAG ATGCACGCCG GGGCTGCCGG TCGCCGCATG TGGCTGGACT GCGTGAAGCT GGGTATCGAG ACGCGCAAGC AACTGCTGGA ACGCTGCTCG CAGCTCAGGC CGTTTATTCC GCCGCAGGTG GCGGGTAAAA ACTGGCAGGA TTACGACACC GATCTGATCG CCAACGACGC GCGTTTCTTC AATTTTGTGC CGGATGAAAA ATGGCACGGT TTTGAAGGTT ACGCGCAGGA TCAGTACCTG GTCGACCCGT GCAAGCTGCT GCTGACGACG CCGGGTATCG ACGCGGCTAC CGGCCAGTAC ACCGAGTTTG GCGTACCGGC GACTATTCTG GCCAACTTCC TGCGTGAGAA CGGCATAGTG CCGGAGAAAT GCGATCTTAA CTCGATCCTG TTCCTGCTGA CCCCGGCGGA AAATCCGGCC AAGATGGAAC AGTTGGTGGA TATGCTGGTG CAGTTCGAAC GCTATGTGGA AGAGGACGCG CCGCTGAGCG TGGTGCTGCC AACGGTGTAT CGCAAGAATG AACAGCGCTA TCGCGGCTAT ACCCTTCGCC AATTGTGCCA GGAAATGCAT GACCTGTACG TCAGCTTTGA CGTCAAACAG TTGCAGAAAG AAATGTTCCG CCAGCGTCAT TTCCCGCAGG TGATGATGAA CCCACAGGAT GCCAACGTGG AGTTTATCCG CGACAACGTT GAACTGGTGC CGATTGGCCA GGCGGAAGGG CGCATTGCGG CGGAGGGCGC GCTGCCATAC CCACCGGGCG TATTGTGCGT GGTGCCGGGG GAAGTATGGG GCGGGGCGGT GCAGCGTTAC TTCCTGGCGC TGGAAGAGGG TATCAACCGG CTACCGGGCT TCTCGCCGGA GCTGCAGGGC GTGTATATCG AGAAAAAGGA TCACGGCTGG AAACGTATCT TCGGTTATAT GATCAAGCAA TAG
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Protein sequence | MKELKIATSA SLVATIETLR QVVRIEQTDY TDVAALVVSV DDVNAGHLAQ LKATGFEIPT FVAVAGDEHL SPDYLPLISG VFALEGASKA FYMAQLEAAA DAYEQALLPP FFKTLKTYVE MENSTFACPG HQGGEFFRKH PAGRKFFEFY GETLFRSDMC NADVKLGDLL IHEGSAKDAQ KHAARVFNAD KTYFVLNGTS AANKVVTNAL LTRGDLVLFD RNNHKSNHHG ALIQAGATPV YLETARNPFG FIGGIDSRCF DERYLREQIR EVAPEKANAA RPFRLAIIQL GTYDGTIYNA RQVIDTIGHL CDYILFDSAW VGYEGFIPML KECSPLLLEL DELDPGIFVT QSVHKQQAGF SQTSQIHKKD DHIKGQKRHC NHKHLNNAFM LHASTSPFYP LFAALDVNAK MHAGAAGRRM WLDCVKLGIE TRKQLLERCS QLRPFIPPQV AGKNWQDYDT DLIANDARFF NFVPDEKWHG FEGYAQDQYL VDPCKLLLTT PGIDAATGQY TEFGVPATIL ANFLRENGIV PEKCDLNSIL FLLTPAENPA KMEQLVDMLV QFERYVEEDA PLSVVLPTVY RKNEQRYRGY TLRQLCQEMH DLYVSFDVKQ LQKEMFRQRH FPQVMMNPQD ANVEFIRDNV ELVPIGQAEG RIAAEGALPY PPGVLCVVPG EVWGGAVQRY FLALEEGINR LPGFSPELQG VYIEKKDHGW KRIFGYMIKQ
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