Gene Spro_4042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4042 
SymboltrmB 
ID5605794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4479063 
End bp4479782 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content56% 
IMG OID640939602 
ProducttRNA (guanine-N(7)-)-methyltransferase 
Protein accessionYP_001480265 
Protein GI157372276 
COG category[R] General function prediction only 
COG ID[COG0220] Predicted S-adenosylmethionine-dependent methyltransferase 
TIGRFAM ID[TIGR00091] tRNA (guanine-N(7)-)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0870445 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAATG ACGTCATCTC CCCAGAATTT GATGAGAACG GCCGTGCGAT GCGCCGTATC 
CGCAGTTTTG TTCGCCGCCA GGGGCGGTTG ACCAAAGGCC AGCAGCACGC GCTGGACAAC
TATTGGCCGG TGATGGGCGT GGAGTATCAG GCTGAACCTG TCGATATCAC CGCACTGTTT
GGGCGCGATG CGCCGACCGT GCTGGAGATC GGTTTTGGCA TGGGCGCCTC GCTGGTGACC
ATGGCGGGCC ATAACCCGCA GCAGAATTTC TTGGGGATTG AAGTACACTC GCCGGGCGTG
GGCGCCTGCC TGGCCGACGC TACCGAAGCG GAGCTGAGCA ACCTGCGCGT GATGTGTCAC
GATGCGGTTG AGGTGCTGGA GAATATGATC CCGGATGGTT CGCTGGACAT GGTGCAGCTG
TTCTTCCCCG ATCCGTGGCA TAAAGCGCGC CACAACAAAC GTCGCATCGT ACAGACGCCG
TTTGTTGAAC TGGTGCGGCG CAAATTGAAA GTCGGCGGCG TCTTCCATAT GGCCACCGAC
TGGCAGCCTT ACGCAGAACA TATGTTAGAG GTTATGAACG GGATCTCAGG CTATCGTAAT
CTTTCCAGCG ATAATGATTA CGTGCCGCGT CCGGATTCAC GACCACTGAC AAAATTTGAA
TTACGCGGCC AGCGTCTGGG ACATGGCGTT TGGGATTTGA TGTTTGAGAG GAAAGAATAA
 
Protein sequence
MINDVISPEF DENGRAMRRI RSFVRRQGRL TKGQQHALDN YWPVMGVEYQ AEPVDITALF 
GRDAPTVLEI GFGMGASLVT MAGHNPQQNF LGIEVHSPGV GACLADATEA ELSNLRVMCH
DAVEVLENMI PDGSLDMVQL FFPDPWHKAR HNKRRIVQTP FVELVRRKLK VGGVFHMATD
WQPYAEHMLE VMNGISGYRN LSSDNDYVPR PDSRPLTKFE LRGQRLGHGV WDLMFERKE