| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4035 |
|---|
| Symbol | |
|---|
| ID | 5605576 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 4474777 |
|---|
| End bp | 4475916 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640939595 |
|---|
| Product | coproporphyrinogen III oxidase |
|---|
| Protein accession | YP_001480258 |
|---|
| Protein GI | 157372269 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.023291 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAAGT TGCCTCCGCT GAGTTTGTAC ATCCATATCC CGTGGTGCGT GCAGAAATGC
CCGTACTGCG ACTTCAACTC GCATGCGTTA AAGGGCGAAG TCCCGCATCA GGAATATGTT
GATCACCTGC TGGCGGATCT GGATGCCGAT CTGCCGCTGG TGGCCGGCCG GGAAGTCAGT
ACCATTTTTA TCGGCGGCGG CACCCCCAGC CTGCTGAGTG CCGAGGCGAT GCAATCGCTG
CTGGACGGCG TGCGGGCGCG CATTCACGTC GTTGATGGCG CAGAGATCAC CATGGAGGCC
AACCCCGGCA CCGTGGAAGC CGATCGCTTC AGCGGCTATC AGCGGGCCGG TGTGAACCGC
ATTTCTATCG GGGTGCAGAG CTTCAGCGCC GAGAAGTTAA CCCGTCTGGG GCGCATTCAC
GGCCCGGAAG AGGCCAAACG CGCAGCGCAT CTGGCCACCG GTCTTGGCCT GCGCAGCTTT
AACCTCGATC TGATGCACGG CCTGCCGGAC CAGTCGCTGG AAGAGGCGCT GGACGATTTA
CGCCAGGCGA TTGCCCTGAA CCCGCCGCAC CTGTCGTGGT ATCAGCTGAC CATCGAACCC
AATACCCTGT TCAGCTCACG CCCGCCGGTA CTGCCGGACG ACGATGCGCT GTGGGATATT
TTCGAACGCG GTCATGAGTT GCTGAGCGCC GCCGGCTATC AGCAGTATGA AACTTCGGCC
TATGCCAAGC CGGGCTATCA GTGCCAGCAC AACCTCAACT ACTGGCGCTT TGGCGACTAT
CTGGGGATTG GCTGTGGCGC ACACGGTAAA CTGACCTTCA GCGACGGCCG CATTCTGCGC
ACCGCGAAAA CCAAGCATCC GCGCGGTTTT ATGCAGGGCA AGTATATGGA CAAGCAGCAT
GAGGTGACGA CGGCGGATCG GCCGTTCGAG TTCTTTATGA ACCGTTTCCG CCTGCTGGAG
GCCGCGCCGC GCGCCGAGTT CGTCAACTAC ACCGGGCTGG ATGAAAGCAC TATCCGCGCA
CCGCTGGATG AAGCACTGGC GAAAGGTTAT CTGGAAGAGA CGCCGGAATA TTGGCAGATC
ACCGAGAAGG GCAAGCTGTT CCTTAACTCG TTGCTGGAGC TGTTTCTGGC GGATGAATAG
|
|---|
| Protein sequence | MLKLPPLSLY IHIPWCVQKC PYCDFNSHAL KGEVPHQEYV DHLLADLDAD LPLVAGREVS
TIFIGGGTPS LLSAEAMQSL LDGVRARIHV VDGAEITMEA NPGTVEADRF SGYQRAGVNR
ISIGVQSFSA EKLTRLGRIH GPEEAKRAAH LATGLGLRSF NLDLMHGLPD QSLEEALDDL
RQAIALNPPH LSWYQLTIEP NTLFSSRPPV LPDDDALWDI FERGHELLSA AGYQQYETSA
YAKPGYQCQH NLNYWRFGDY LGIGCGAHGK LTFSDGRILR TAKTKHPRGF MQGKYMDKQH
EVTTADRPFE FFMNRFRLLE AAPRAEFVNY TGLDESTIRA PLDEALAKGY LEETPEYWQI
TEKGKLFLNS LLELFLADE
|
|---|
| |