Gene Spro_4025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4025 
Symbol 
ID5605377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4467901 
End bp4468632 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content58% 
IMG OID640939585 
Producthypothetical protein 
Protein accessionYP_001480248 
Protein GI157372259 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00355277 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00148636 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCATAC CTCGCATTTA TCACCCGCAG CCGTTAATCG ACCATGCGGA AATCTTCTTA 
AGCGAAGACG CCGCCAACCA TATCGGGCGT GTACTGCGCA TGAACGCCGG CCAGGCGCTG
CAGTTATTCG ACGGCAGCAA TCAGGTGTTT GACGCCGTGA TCGCCCAGGT CGACAAGAAA
AGCGTGCAAG TGCAGCTCAG CGCCGGCCAG TTGGAAGACC GTGAATCACC GCTCAATCTG
CATCTGGGTC AGGTAATTTC TCGCGGTGAG AAAATGGAGT TCACCATTCA GAAATCCATC
GAGCTGGGGG TCAACGTCAT TACCCCGCTG TTTTCCGAGC GCTGCGGCGT TGCGCTTTCC
GGCGAACGCC TGGCGAAAAA AATTCAGCAG TGGCAGAAGA TTGCCATCGC CGCCTGCGAA
CAGTGCGGCC GCAACCGCAT CCCGGAAATC CGCGAGGCCA TGCAGCTGGA AGCCTGGTGT
GCCGAGCAGG ATGGCAGCCT CAAGCTTAAC CTGCACCCGC GCGCCAGCCA TAGCATCAAC
ACCCTGCCGC TACCGGTGGA AAATGTCCGG TTGCTGATTG GGCCGGAAGG CGGTTTATCT
ACAGGCGAAA TTGCGATGAC CACAGGCCAC GGATTTACTG ATATCCTGCT GGGGCCACGC
GTTCTGCGTA CAGAAACCAC AGCGCTCACC GCAATTACCG CTTTGCAGGT ACGTTTCGGC
GATCTGGGTT AA
 
Protein sequence
MRIPRIYHPQ PLIDHAEIFL SEDAANHIGR VLRMNAGQAL QLFDGSNQVF DAVIAQVDKK 
SVQVQLSAGQ LEDRESPLNL HLGQVISRGE KMEFTIQKSI ELGVNVITPL FSERCGVALS
GERLAKKIQQ WQKIAIAACE QCGRNRIPEI REAMQLEAWC AEQDGSLKLN LHPRASHSIN
TLPLPVENVR LLIGPEGGLS TGEIAMTTGH GFTDILLGPR VLRTETTALT AITALQVRFG
DLG