Gene Spro_3988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3988 
Symbol 
ID5602805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4423804 
End bp4424304 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content59% 
IMG OID640939548 
Product2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 
Protein accessionYP_001480211 
Protein GI157372222 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00992248 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCG TTTATATCGC GCTGGGCAGC AACCTGGCGC ACCCGCTACA GCAGGTGAAA 
GCCGCACTGG AAGCGCTGGA GCATCTCCCG CGCACCCGGT TGATCGTCTG TTCTTCGTTT
TACCGCACCA AGCCGCTGGG GCCGCAGAAC CAGCCGGACT TTCTCAATGC GGTGGTGGCA
CTGGATACCT TGCTGCCCGC CGAACAGTTA CTCGATCACA CCCAGGCGAT TGAACGCAAT
CAGGGCCGCG TGCGCAAAGA TGAGCGCTGG GGCCCACGCA CCCTCGATCT GGATATCATG
CTGTATGGCG AACAAGTGAT CCATACCGAT CGCCTGACGG TGCCGCACTA CGGTCTGAAA
GAGCGTGAGT TTATGCTCTA TCCGTTGGCA GAAATCGCCC CCGAGTTAGT CTTCCCGGAC
GGCGAATCGC TGGTCAGCTG CCTGAAGCGC GTACCGCAAA ACGGCATGGA GCTTTGGCAC
CAACCCAGGC AAAAAGTCTG A
 
Protein sequence
MIRVYIALGS NLAHPLQQVK AALEALEHLP RTRLIVCSSF YRTKPLGPQN QPDFLNAVVA 
LDTLLPAEQL LDHTQAIERN QGRVRKDERW GPRTLDLDIM LYGEQVIHTD RLTVPHYGLK
EREFMLYPLA EIAPELVFPD GESLVSCLKR VPQNGMELWH QPRQKV