Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_3987 |
Symbol | pcnB |
ID | 5602804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 4422287 |
End bp | 4423804 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640939547 |
Product | poly(A) polymerase I |
Protein accession | YP_001480210 |
Protein GI | 157372221 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
TIGRFAM ID | [TIGR01942] poly(A) polymerase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000599452 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCTAATCC GCGATGACAA GCAACCGCGC GACGATGCGC CGGTCAGCGA TAAAAACGTA GTCCGCGAAG AAAGCGTGGT GGCGGAACAG CCGGCCGCGC CGCAGCGACG TTCCGTCGAA CGCGGCAGAG AAAGCCCTGC CCGCCGGCCG GCACCGCGTA AACGCCCCCC TTTTCCTGCC GCAGAGGGAA CCGGCTCAAT GACCGTGATC CCACGCGACC AGCATTCCAT CTCACGTAAA GACATCAGTG AGAATGCGCT GAAGGTGCTG TATCGCCTGA ACAAATCCGG CTTCGAAGCC TATCTGGTCG GTGGCGGCGT ACGCGACCTG CTGCTGGGCA AAAAACCGAA AGATTTCGAC ATCACCACCA ACGCGACGCC GGAGCAAGTG CGCAAGCTGT TCCGCAACTG CCGTCTGGTT GGCCGCCGCT TCCGCCTGGC CCACGTGATG TTCGGGCCGG AAATCATTGA GGTTGCCACC TTCCGTGGTC ACCACGAGCA GCAAACGCCG GAGTCTGACA AAAATTCTTC CCAGCAGGCC CAAAACGGCA TGCTGCTGCG CGACAACATC TTTGGTTCGA TCGAAGAAGA TGCCCAGCGC CGCGACTTCA CCATCAACAG CCTGTATTAC GGCGTAGCGG ACTTCACCCT GCGTGATTAC GTCGATGGCC TGCGCGATCT TAAACAGGGC GTGATCCGCC TGATTGGCGA TCCGGAAACC CGTTATCGTG AAGACCCGGT GCGTATGCTG CGCGCGGTGC GCTTTGCCGC CAAGCTGGAC ATGACCATCA GCGATGAAAC CGCCGAGCCA ATCCCGCGTC TGGCGTCCTT GCTGCATGAG ATCCCGCCGG CGCGTCTGTT TGAGGAATCA CTCAAGCTGC TGCAGGCAGG CTACGGTTAC CCGACCTATC TGAAACTCTG TGAATACCAG CTGTTCCAGC CGCTGTTCCC GCAGATTGCA CGTCACTTCA CGCCGGGTCA GGACACGCCA ATGGAGCGTA TTCTGGCGCA GGTGCTGAAG AACACCGACT ACCGTCTGCA AAACAACATG CGCGTCAATC CGGCGTTCCT GTTTGCTGCT ATGCTTTGGT ATCCGCTGCT GGAACATGCG CAGAAACTGG CGCAGGAAAG TGGGCTGGCT TACTACGACG CCTTCGCGCT GGCGATGAAT GATGTGTTGG ACGAGCAGTG TCGTTCGCTG GCCATTCCGA AACGCATCAC CACGCTGGTT CGCGATATCT GGCAGTTGCA GCTGCGTCTG TCCCGCCGTC AGGGCAAGCG TGCGCACAAG CTGATGGAAC ATCCGAAATT CCGCGCCGCT TACGATTTGC TGGCGCTGCG TGCCGAAGTA GAAGAAAACC AGGAGATGCT GCGTCTGACC GAATGGTGGG GCGAGTTCCA GGAAGCCACA CCGGCACGAC AGAAAACCAT GTTAAGTACT TTGGGTGACG ATCCGGCACC GCGCCGTGCG CGTCAGCGCC GCCCTCGCCG TCGGACGCCG CGTAAAGAAG GAGAATAA
|
Protein sequence | MLIRDDKQPR DDAPVSDKNV VREESVVAEQ PAAPQRRSVE RGRESPARRP APRKRPPFPA AEGTGSMTVI PRDQHSISRK DISENALKVL YRLNKSGFEA YLVGGGVRDL LLGKKPKDFD ITTNATPEQV RKLFRNCRLV GRRFRLAHVM FGPEIIEVAT FRGHHEQQTP ESDKNSSQQA QNGMLLRDNI FGSIEEDAQR RDFTINSLYY GVADFTLRDY VDGLRDLKQG VIRLIGDPET RYREDPVRML RAVRFAAKLD MTISDETAEP IPRLASLLHE IPPARLFEES LKLLQAGYGY PTYLKLCEYQ LFQPLFPQIA RHFTPGQDTP MERILAQVLK NTDYRLQNNM RVNPAFLFAA MLWYPLLEHA QKLAQESGLA YYDAFALAMN DVLDEQCRSL AIPKRITTLV RDIWQLQLRL SRRQGKRAHK LMEHPKFRAA YDLLALRAEV EENQEMLRLT EWWGEFQEAT PARQKTMLST LGDDPAPRRA RQRRPRRRTP RKEGE
|
| |