Gene Spro_3978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3978 
Symbol 
ID5602980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4409363 
End bp4410160 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content60% 
IMG OID640939538 
Productiron-hydroxamate transporter ATP-binding subunit 
Protein accessionYP_001480201 
Protein GI157372212 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGATA AACACCCCAA TCACGACGCC ACTTTTACGT TAGACAGCGC CAGCTTTGCC 
GTTCCCGGCC GCGTGCTGTT GCAGCCGTTA TCGCTGACCT TTCCCGTGGG AAAAGTCTGT
GGGCTGATCG GCCATAACGG CTCCGGTAAA TCCACGCTGC TAAAAATCCT TGGTCGCCAT
CAAAGCCCCA CCACCGGCAA CGCGCTGCTT AACCAGCAGC TACTGGGCCA GTGGGACAGC
AAGGCCTTTG CGCGTCAGGT CGCCTATCTG CCCCAGCAAC TGCCCGCTGC AGAAGGCATG
ACGGTGCGTG AACTGGTGGC GATTGGCCGC TATCCGTGGC ATGGCGCGCT GGGCCGTTTT
GGCGCTAACG ATCGTCAGCA GGTGGAGGAG GCGATTGCGC TGGTGGGTTT GAAGCCATTT
GCCAACCGCC TGGTGGACAG CCTGTCCGGC GGGGAGCGTC AACGCGCCTG GCTGGCGATG
ATGGTGGCGC AAGACAGCCG CTGTCTGCTG CTGGATGAAC CTACCTCGGC ACTGGATATC
GCTCATCAGG TTGAGGTGCT GGCGCTGATC CAGCAACTGA GCCGACAACG TGGCCTGACG
GTGATTGCGG TACTGCACGA TATCAATATG GCGGCGCGCT ACTGCGACCA TCTGGTGGCC
TTGCGCGGCG GTGAGATGAT TGCCCAGGGC AGCCCACTGG ATCTGATGCA GGGCGAGGTG
CTGGAACAAA TTTACGGTAT TCCTATGGGA ACGCTGCCAC ATCCAAGCGG CGGTGCGCCG
GTGAGTTTTG TCTACTGA
 
Protein sequence
MQDKHPNHDA TFTLDSASFA VPGRVLLQPL SLTFPVGKVC GLIGHNGSGK STLLKILGRH 
QSPTTGNALL NQQLLGQWDS KAFARQVAYL PQQLPAAEGM TVRELVAIGR YPWHGALGRF
GANDRQQVEE AIALVGLKPF ANRLVDSLSG GERQRAWLAM MVAQDSRCLL LDEPTSALDI
AHQVEVLALI QQLSRQRGLT VIAVLHDINM AARYCDHLVA LRGGEMIAQG SPLDLMQGEV
LEQIYGIPMG TLPHPSGGAP VSFVY