Gene Spro_3924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3924 
Symbol 
ID5604008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4347888 
End bp4348607 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content54% 
IMG OID640939484 
Productribose-5-phosphate isomerase A 
Protein accessionYP_001480147 
Protein GI157372158 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0120] Ribose 5-phosphate isomerase 
TIGRFAM ID[TIGR00021] ribose 5-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.266536 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAATA GCGATTTACC CTATAATACG CACACGTTTT CGTACAGAGG CAATGGACAT 
ATTATGACGC AGGATGAACT GAAAAAAGCG GTTGGCTGGG CAGCACTGGA TTACGTTACC
CCGGGCACCA TCGTTGGGGT CGGCACTGGC TCGACTGCCG CCCATTTTAT TGACGCGCTC
GGCTCGATCA AGCACCAGAT CGAAGGGGCG GTGTCCAGCT CTGACGCCTC TACCGCCAAG
CTGAAAAGCC TCGGTATCCA CGTTTTCGAC AGCAATGAAG TGGATTCACT GGATATTTAT
GTCGACGGCG CGGATGAAAT CAACCGCCAT ATGCAGATGA TCAAAGGCGG CGGCGCTGCG
CTGACGCGTG AAAAAATCAT TGCCGCTATC GCGCGCAAAT TTATCTGTAT TGTCGATTCC
AGCAAACAGG TCGATGTGTT GGGTAAATTC CCTCTGCCGG TAGAAGTCAT CCCGATGGCA
CGTTCTTACG TAGCGCGTGA GCTGGTCAAG CTGGGCGGGC TGCCGGAGTA TCGTCAGAAT
GTCCTGACCG ATAACGGCAA CGTGATCCTC GATGTGCATA ACCTGAGTAT CATGGACGCC
ATTGCGCTGG AAAACAAAAT CAACGGCATC GCCGGTGTGG TGACCGTGGG TCTGTTCGCC
AACCGGGGTG CCGATGTGGC GCTGGTAGGT ACGCCTGACG GCGTGAAGGT TGTCGAATAA
 
Protein sequence
MKNSDLPYNT HTFSYRGNGH IMTQDELKKA VGWAALDYVT PGTIVGVGTG STAAHFIDAL 
GSIKHQIEGA VSSSDASTAK LKSLGIHVFD SNEVDSLDIY VDGADEINRH MQMIKGGGAA
LTREKIIAAI ARKFICIVDS SKQVDVLGKF PLPVEVIPMA RSYVARELVK LGGLPEYRQN
VLTDNGNVIL DVHNLSIMDA IALENKINGI AGVVTVGLFA NRGADVALVG TPDGVKVVE