| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3860 |
|---|
| Symbol | |
|---|
| ID | 5606072 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 4272508 |
|---|
| End bp | 4273437 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640939420 |
|---|
| Product | curved DNA-binding protein CbpA |
|---|
| Protein accession | YP_001480084 |
|---|
| Protein GI | 157372095 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.167572 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTCA AGGACTACTA TGCCATTTTA GGGGTTAAGC CGGCGGACGA TCTCAAGGCA
ATCAAAACTG CCTATCGCCG ACTGGCACGA AAATATCACC CCGACGTCAG CACCGAATCG
AATGCCGAGG AACAGTTCAA ACTGGTCGCC GAAGCCTATG AAGTGCTGAA AGACGACGAA
CGCCGCGCCG AATATGATCA ACTGCGAGAG CACCGCAACG ATCCCAATTT TGGCCGCCAG
ACGCAGCATG GCAGTGCTCA TAACGCCGAA GATTTTTCCG ATATTTTCTC CTCCATGTTC
GGCGAACATG CCCGTGGCCA ACAACATCGT CAACGACGTC AGGGCATGCG CGGCCAGGAT
GTTGAAATGG AAGTGGCTAT CTTCCTGGAA GAAACCCAGG CCGAGCAAAC CCGTACCATT
CGCTATAGCC TGCCGGTATA TAACGCTTTC GGCATGGTGG AGCAGGAAAT TCCTAAAACC
CTTAATGTGA AAATCCCCGC CGGCGTTGGC GATGGCGAAC GCATTCGTCT TAAGGGCCAG
GGCGGACCAG GAACTGACGG TGGTGCCAGC GGCGATCTCT ATCTGATCAT CCGCATTGCT
CCGCATCCAT TGTTCGACAT CGTCGGTCAC AATCTGGAGA TCGTGCTGCC AGTCGCCCCG
TGGGAAGCCG CACTCGGCGC CAAAGTACCG GTACCCACAC TGAAAGACAG TATCCTGTTG
ACCATTCCTG CCGGTAGCCA AACCGGGCAG CGCTTGCGCA TCAAGGGAAA AGGCCTGGTC
GGCAAAAAAG AAACCGGGGA TTTGTATGCC GTGATCAAGG TCATGATGCC ACCGAAGCCG
GACGAAAAAA GCGCCGCGCT GTGGCAACAG TTGGCAGAAG CCCAGCAGAG CTTCGATCCG
CGCAAAGACT GGAGTAAGCA AAATGGCTAA
|
|---|
| Protein sequence | MEFKDYYAIL GVKPADDLKA IKTAYRRLAR KYHPDVSTES NAEEQFKLVA EAYEVLKDDE
RRAEYDQLRE HRNDPNFGRQ TQHGSAHNAE DFSDIFSSMF GEHARGQQHR QRRQGMRGQD
VEMEVAIFLE ETQAEQTRTI RYSLPVYNAF GMVEQEIPKT LNVKIPAGVG DGERIRLKGQ
GGPGTDGGAS GDLYLIIRIA PHPLFDIVGH NLEIVLPVAP WEAALGAKVP VPTLKDSILL
TIPAGSQTGQ RLRIKGKGLV GKKETGDLYA VIKVMMPPKP DEKSAALWQQ LAEAQQSFDP
RKDWSKQNG
|
|---|
| |