Gene Spro_3843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3843 
Symbol 
ID5606432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4253515 
End bp4255251 
Gene Length1737 bp 
Protein Length578 aa 
Translation table11 
GC content57% 
IMG OID640939403 
ProductABC transporter 
Protein accessionYP_001480067 
Protein GI157372078 
COG category[R] General function prediction only 
COG ID[COG4178] ABC-type uncharacterized transport system, permease and ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAA CCCCAACCCC CAAACACGCC GTCTGGCAAT TAATTAAACC CTTCTGGGTT 
TCGGAAGAAA AGCTGCGGGC CTGGTCGATG CTGATCGCCA TTGTCGCTTT GTCGCTCGGG
CTGGTGTACA TCAGCGTACA GATCAATGAG TGGAACCAGG TGTTTTACGA CGCGCTGCAA
AACAAAAACT ATCCGGTATT CAAGGCGCAA CTGTGGCGCT TTACCTATTT GGCGCTGATC
TTTATCGTGC TGGCAGTCTA TAAAATTTAC CTGACGCAGG GCCTGCAGAT GCGCTGGCGG
CGCTGGATGA CGGAAAAATT TATGGGTAAA TGGCTGGCGC ATCAGGCCTA TTACCATACC
GAACAGCAAC AGATCGTCGA TAACCCGGAC CAGCGTATTG CCGAAGATCT CAATGTACTG
ACCCAGTACA CGCTGTCGCT GTCGCTCGGG CTGCTCTCCA GCCTGGTGAC GCTGTTTTCC
TTTATCACCA TTCTCTGGCA CGTCAGCGGG CCAATGACTT TTGTTATCCA TCAGCATGCC
GTCACCCTGC CCGGCTACAT GGTGTGGTTC GCCCTGCTGT ACGCGGTGCT GGGTTCGCTG
TTGATTTGGT GGGTCGGTAA ACCGCTGGTC CAGCTCGGCT TTAATCAGGA GCGCTATGAA
GCAAACTTCC GTTTTGGGCT GATCCGTATC CGGGAAAACA ACGATGCCAT CGCGCTTTAT
CACGGCGAAC CACGCGAAGC GCAACAGTTG GGTGACCGCT TTGACAGCAT CCGCACCAAC
TGGTGGTCAA TCATGCGCAT CACCCGCCGG CTGAACATCG CCTCTAATTT TTACAGCCAG
TTTGCCATTG TTTTCCCGCT GTTGGTGGCA GCACCGCGTT ACTTCTCCGG CGCTATCCAG
ATGGGCGGCA TGATGCAGAT CGCCTCCGCC TTTGGCCAGG TACAGGGGGC GCTGTCATGG
TTTATCGATG CCTTTAGCGA TCTGGCGACC TGGAAAGCCT GCGTTAACCG TCTGGCCGGT
TTTAACGCCG CCGTGGATCA GGTACACCAT CAGCAACGCG GCATTCAACT GCAAGCGGAA
AACGACCAAC CGCTGATCCT CGATCGTCTC AGCCTGCAAC TGCCGGACGG TCAAAGTTTG
CTGGGCTCAA CGTCGATGAC GCTGAAACGC GGTGAGAAAG TGCTGGTCGT CGGCCCTTCG
GGCTGCGGTA AATCCACGCT GCTGCGTGCT ATCGCCGGGA TCTGGCCCTA CGGCTCCGGC
ACCATTGGCC GCGACGCGGC CAGCAGCGCC TTATTCCTGC CACAACGCAG CTATATTCCC
ATCGGCACGC TGCGCGAGGC GCTCAGTTAT CCGCATCTCG CGGCCGAATA CAGTGATGAA
CAACTGCTGA GAGTGCTGGA AAATTGCCGT CTGAAGCATC TGCAACGCTG GCTGGACACC
AGCGCCAACT GGAGCCACCG CCTGTCGCCA GGCGAGCAAC AGCGGATGGC ATTCGCCCGT
GCGATTCTGA TCCGCCCGGA TATTCTGTTC CTCGACGAGG CCACCAGCGC GCTGGACGAT
GAAACCGAGC AGTTGATGTA TTGCCTGTTG GTGGATGAAC TGCCGCAGGT GACGTTGGTC
AGCGTGGCGC ACCGCAACAG CGTGGCGAAA TACCATCAGA GCTGCTGGCG CTTTAGCCGC
CCGGAGGAGA ATCAACCGGC CCGCATGGCG CTTAGCCCGC TGCCGGTCGT CGGTTAA
 
Protein sequence
MNATPTPKHA VWQLIKPFWV SEEKLRAWSM LIAIVALSLG LVYISVQINE WNQVFYDALQ 
NKNYPVFKAQ LWRFTYLALI FIVLAVYKIY LTQGLQMRWR RWMTEKFMGK WLAHQAYYHT
EQQQIVDNPD QRIAEDLNVL TQYTLSLSLG LLSSLVTLFS FITILWHVSG PMTFVIHQHA
VTLPGYMVWF ALLYAVLGSL LIWWVGKPLV QLGFNQERYE ANFRFGLIRI RENNDAIALY
HGEPREAQQL GDRFDSIRTN WWSIMRITRR LNIASNFYSQ FAIVFPLLVA APRYFSGAIQ
MGGMMQIASA FGQVQGALSW FIDAFSDLAT WKACVNRLAG FNAAVDQVHH QQRGIQLQAE
NDQPLILDRL SLQLPDGQSL LGSTSMTLKR GEKVLVVGPS GCGKSTLLRA IAGIWPYGSG
TIGRDAASSA LFLPQRSYIP IGTLREALSY PHLAAEYSDE QLLRVLENCR LKHLQRWLDT
SANWSHRLSP GEQQRMAFAR AILIRPDILF LDEATSALDD ETEQLMYCLL VDELPQVTLV
SVAHRNSVAK YHQSCWRFSR PEENQPARMA LSPLPVVG