Gene Spro_3776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3776 
SymbolrnhB 
ID5607352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4175520 
End bp4176113 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content59% 
IMG OID640939333 
Productribonuclease HII 
Protein accessionYP_001480000 
Protein GI157372011 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0312514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00441554 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTGAAC CCTTCATTTA TCCTGTCGCC ACGCTGATTG CCGGCGTGGA CGAAGTCGGC 
CGTGGCCCTT TGGTCGGGGC GGTAGTGACC GCCGCAGTGA TCCTCGATCC TGCGCGACCA
ATCGTTGGGC TGGCGGACTC GAAAAAACTC AGTGAAAAGC GCCGCCTGGC GCTGTATGAC
GAAATCGTCG AAAAGGCACT TTCCTGGAGT CTGGGGCGAG CCGAGCCGGA CGAGATCGAT
CAACTGAACA TTCTGCATGC CACCATGCTG GCGATGCAGC GAGCGGTTGC CGGATTGCAT
ATCGCGCCGG ACATGGTATT GATCGACGGT AACCGTTGTC CTAAATTACC GATGCGTTCG
CAGGCGGTGG TGAAGGGCGA TAGCCGCGTG GCAGAAATCA GCGCCGCGTC CATTCTGGCG
AAGGTAACGC GTGATCGCGA AATGACCGAG TTGGATCGGG AATTCCCGGA CTACGGTTTT
GCGCAGCATA AAGGCTACCC AACCGCTTTC CATCTGGAGC GGCTGGCCGC ACTGGGTGCG
ACCGAGCATC ATCGCCGCAG CTTTGCCCCG GTTAGAAGGG TGCTGGCGCT GTAA
 
Protein sequence
MIEPFIYPVA TLIAGVDEVG RGPLVGAVVT AAVILDPARP IVGLADSKKL SEKRRLALYD 
EIVEKALSWS LGRAEPDEID QLNILHATML AMQRAVAGLH IAPDMVLIDG NRCPKLPMRS
QAVVKGDSRV AEISAASILA KVTRDREMTE LDREFPDYGF AQHKGYPTAF HLERLAALGA
TEHHRRSFAP VRRVLAL