Gene Spro_3738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3738 
Symbol 
ID5607429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4127514 
End bp4128713 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content62% 
IMG OID640939290 
Productmajor facilitator transporter 
Protein accessionYP_001479962 
Protein GI157371973 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.346583 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAC AACATTCACA GCCGGGTCTC AGCCCGGCGC TGATCGTGCT GATCGCCATC 
GCCACCGGTC TGGCGGTCGC CAGTAACTAT TATGCCCAGC CGCTGCTGGA AACCATCGCC
CAGAACTTCG ATTTATCGGT CAATCAGGCC GGCTTTATCG TCACTGCCGC CCAGTTGGGC
TACGCCGTTG GCCTGCTGTT GCTGGTGCCA CTCGGCGATA TGTTTGAACG CCGCGGCCTG
ATCGTCTTTA TGACGCTGCT GGCGGCGGGC GGCATGCTGA TCACCGCCAG TTCCACGACC
TTGCCGATGA TGATCCTCGG GACCGCGCTC ACCGGGCTGT TCTCGGTGGT GGCGCAAATT
CTGGTGCCAC TGGCGGCCAC CCTGGCCCAT CCGGAAAAAC GCGGCAAAAC CGTCGGCATT
ATCATGAGCG GCCTGCTGCT CGGCATTCTG TTGGCGCGCA CCGTAGCCGG AGCGCTGGCG
TCACTCGGCG GCTGGCGCAC CATCTACTGG GTCGCCAGCG TGCTGATGAT CCTGATGGCA
TTGATCCTGT GGCGCGCACT GCCGCGTTAC AAGCAGCATT CGGGGCTGAA TTACCCGCAG
TTGCTGAAAT CGATCTTCAC CCTGTTTTGT GGTACTCCGC TGCTGCGTAC CCGCGCGATA
CTCGGGGCGC TGTCGTTCGC CAACTTCAGC GTGCTGTGGA CTTCGATGGC CTTTTTACTG
GCGGCTCCGC CGTTTGGTTA TTCCGAAGGG GTGATTGGTC TGTTTGGCCT GGTCGGCGCT
GCCGGCGCAT TGGCGGCTTC ACGCGCCGGG CATTTGGCGG ATCAGGGTAA GGCCGGTTTA
ACCACCAGCG TGGGCCTGGT CCTGCTGCTG CTTTCCTGGA TACCCATCGC TTTCGCTAAA
CAATCCCTGT GGGCGTTGAT CGCCGGTATC CTGATCCTCG ACCTGGCCGT GCAGGCCGTA
CACGTCACTA ACCAGAGCGT GATTTACCGC ATTATGCCGG AAGCGCGCAA CCGCCTGACC
GCCGGCTACA TGACCAGCTA TTTCATCGGG GGGGCACTCG GCTCACTGCT GTCTGCCTCG
GCCTATCAAC ATGCGGGTTG GACCGGCGTT GCCGTGGCCG GGGGCGTTTT GTGCCTGCTC
AACCTGCTGA CCTGGTGGCG CGGCAAGCAC CACGATCCGC AAGGACCGGC GACAATCTGA
 
Protein sequence
MSQQHSQPGL SPALIVLIAI ATGLAVASNY YAQPLLETIA QNFDLSVNQA GFIVTAAQLG 
YAVGLLLLVP LGDMFERRGL IVFMTLLAAG GMLITASSTT LPMMILGTAL TGLFSVVAQI
LVPLAATLAH PEKRGKTVGI IMSGLLLGIL LARTVAGALA SLGGWRTIYW VASVLMILMA
LILWRALPRY KQHSGLNYPQ LLKSIFTLFC GTPLLRTRAI LGALSFANFS VLWTSMAFLL
AAPPFGYSEG VIGLFGLVGA AGALAASRAG HLADQGKAGL TTSVGLVLLL LSWIPIAFAK
QSLWALIAGI LILDLAVQAV HVTNQSVIYR IMPEARNRLT AGYMTSYFIG GALGSLLSAS
AYQHAGWTGV AVAGGVLCLL NLLTWWRGKH HDPQGPATI