Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_3699 |
Symbol | |
ID | 5607019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 4089542 |
End bp | 4090714 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640939251 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001479923 |
Protein GI | 157371934 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAAA ACGCATTATG CTTAACCGGC AGCTTACTGC TGTGCGGCGG TCTGCTGCTT ACCGGTTGTA AAGATAAAAA CCCTAAGGCC ACGCAGCTTC CGCCGCATCC GGTCGGTGTA GTCACCTTGC GCTCTCAGCC ACTGGCAATA AAAACAGAAC TGCCGGGTCG CACCAATGCT TACCGCACGG CGGAAGTCCG GCCCCAGGTC AGCGGTATTG TCCTCAAGCG CCAGTTTGTC GAAGGCAGTG ACGTGCAGGC TGGCCAATCG CTGTATCAGA TCGACCCGGC CAGCTATCAG GCCGCCTGCG ACAGCGCGCT GGGCGATCTG AAAAAGGCCC AGGCCAGCAG CGAAATAGCG CATCTGACCG TAAAGCGTGA GCAACCGCTG CGGGCCAAAA ACTACGTCAG CCCGCAGGAG TTCGACACCA GCGTGGCTCA AGCCAGGCAG GCCGATGCCG ATGTTATCGC CGCCCGCGCA GCACTGGAAA GCGCACGTAT CAACCTGCAG TACACCAAGG TTATTGCGCC AATCTCCGGG CGCATCGGCA AATCCAGCGT CACCGAAGGT GCGCTGGTGA CCTCCAGCCA GAGCAGCGCG CTGGCGACGG TGCAACAATT GGATCCGATG TATGTCGACG TCACCCAGTC CAGCGACGAT TTCCTCAAGC TTAAACAGGC TATCGCCTCC GGTACCATTA CCCACAACGG CGGCAAAGTG CCGGTCAGCC TGATCCTGAA TAACGGCCAG CGTTATCAGC CGACTGGCAC CCTGGAATTC TCCGACGTCA CCGTTGACCA AAGCACCGGT TCCATTACCC TGCGCGCCAT CATCCCTAAT CCGCAGCATA GCCTGCTGCC CGGCATGTAT GTCCGCGCCG AGATTGACCA GGGGCAGCAG AAAAACGCGC TATTGGTGCC GCAGCAAGGT ATCACTCGCA ACCCGCGCGG CGAAGCCACG GCGCTGATTG TCGACGCCCA CAATAAAGCA CAGTTACGTC AGGTGATCGC CAGCCAGGCG ATTGGTGACA AATGGTTGGT GACGTCGGGG TTGCAGGCCG GCGACAAAGT GATCGTCAGC GGCCTGATGC GCCTGAAGCC GGGCATGCAG GTACGGGCAA CGGAAGAGAC GCCGGACACC GCTCAGGCCT TGTCTGACGT CTATCACGGT TAA
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Protein sequence | MNKNALCLTG SLLLCGGLLL TGCKDKNPKA TQLPPHPVGV VTLRSQPLAI KTELPGRTNA YRTAEVRPQV SGIVLKRQFV EGSDVQAGQS LYQIDPASYQ AACDSALGDL KKAQASSEIA HLTVKREQPL RAKNYVSPQE FDTSVAQARQ ADADVIAARA ALESARINLQ YTKVIAPISG RIGKSSVTEG ALVTSSQSSA LATVQQLDPM YVDVTQSSDD FLKLKQAIAS GTITHNGGKV PVSLILNNGQ RYQPTGTLEF SDVTVDQSTG SITLRAIIPN PQHSLLPGMY VRAEIDQGQQ KNALLVPQQG ITRNPRGEAT ALIVDAHNKA QLRQVIASQA IGDKWLVTSG LQAGDKVIVS GLMRLKPGMQ VRATEETPDT AQALSDVYHG
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