Gene Spro_3699 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3699 
Symbol 
ID5607019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4089542 
End bp4090714 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content60% 
IMG OID640939251 
ProductRND family efflux transporter MFP subunit 
Protein accessionYP_001479923 
Protein GI157371934 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAA ACGCATTATG CTTAACCGGC AGCTTACTGC TGTGCGGCGG TCTGCTGCTT 
ACCGGTTGTA AAGATAAAAA CCCTAAGGCC ACGCAGCTTC CGCCGCATCC GGTCGGTGTA
GTCACCTTGC GCTCTCAGCC ACTGGCAATA AAAACAGAAC TGCCGGGTCG CACCAATGCT
TACCGCACGG CGGAAGTCCG GCCCCAGGTC AGCGGTATTG TCCTCAAGCG CCAGTTTGTC
GAAGGCAGTG ACGTGCAGGC TGGCCAATCG CTGTATCAGA TCGACCCGGC CAGCTATCAG
GCCGCCTGCG ACAGCGCGCT GGGCGATCTG AAAAAGGCCC AGGCCAGCAG CGAAATAGCG
CATCTGACCG TAAAGCGTGA GCAACCGCTG CGGGCCAAAA ACTACGTCAG CCCGCAGGAG
TTCGACACCA GCGTGGCTCA AGCCAGGCAG GCCGATGCCG ATGTTATCGC CGCCCGCGCA
GCACTGGAAA GCGCACGTAT CAACCTGCAG TACACCAAGG TTATTGCGCC AATCTCCGGG
CGCATCGGCA AATCCAGCGT CACCGAAGGT GCGCTGGTGA CCTCCAGCCA GAGCAGCGCG
CTGGCGACGG TGCAACAATT GGATCCGATG TATGTCGACG TCACCCAGTC CAGCGACGAT
TTCCTCAAGC TTAAACAGGC TATCGCCTCC GGTACCATTA CCCACAACGG CGGCAAAGTG
CCGGTCAGCC TGATCCTGAA TAACGGCCAG CGTTATCAGC CGACTGGCAC CCTGGAATTC
TCCGACGTCA CCGTTGACCA AAGCACCGGT TCCATTACCC TGCGCGCCAT CATCCCTAAT
CCGCAGCATA GCCTGCTGCC CGGCATGTAT GTCCGCGCCG AGATTGACCA GGGGCAGCAG
AAAAACGCGC TATTGGTGCC GCAGCAAGGT ATCACTCGCA ACCCGCGCGG CGAAGCCACG
GCGCTGATTG TCGACGCCCA CAATAAAGCA CAGTTACGTC AGGTGATCGC CAGCCAGGCG
ATTGGTGACA AATGGTTGGT GACGTCGGGG TTGCAGGCCG GCGACAAAGT GATCGTCAGC
GGCCTGATGC GCCTGAAGCC GGGCATGCAG GTACGGGCAA CGGAAGAGAC GCCGGACACC
GCTCAGGCCT TGTCTGACGT CTATCACGGT TAA
 
Protein sequence
MNKNALCLTG SLLLCGGLLL TGCKDKNPKA TQLPPHPVGV VTLRSQPLAI KTELPGRTNA 
YRTAEVRPQV SGIVLKRQFV EGSDVQAGQS LYQIDPASYQ AACDSALGDL KKAQASSEIA
HLTVKREQPL RAKNYVSPQE FDTSVAQARQ ADADVIAARA ALESARINLQ YTKVIAPISG
RIGKSSVTEG ALVTSSQSSA LATVQQLDPM YVDVTQSSDD FLKLKQAIAS GTITHNGGKV
PVSLILNNGQ RYQPTGTLEF SDVTVDQSTG SITLRAIIPN PQHSLLPGMY VRAEIDQGQQ
KNALLVPQQG ITRNPRGEAT ALIVDAHNKA QLRQVIASQA IGDKWLVTSG LQAGDKVIVS
GLMRLKPGMQ VRATEETPDT AQALSDVYHG