Gene Spro_3627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3627 
Symbol 
ID5606012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4011758 
End bp4012972 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content54% 
IMG OID640939178 
Productcysteine desulfurase 
Protein accessionYP_001479851 
Protein GI157371862 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 
TIGRFAM ID[TIGR02006] cysteine desulfurase IscS
[TIGR03402] cysteine desulfurase NifS 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0168495 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.888851 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAC CGATTTATCT GGATTACTCA GCAACGACGC CGGTTGATCC GCGCGTTGCT 
GAGAAAATGA TGCAATTTTT GACTCTGGAC GGGACTTTTG GTAACCCGGC TTCCCGTTCC
CACCGTTTCG GTTGGCAGGC GGAAGAGGCG GTAGATATCG CCCGTAACCA AATTGCTGAA
CTGGTTGGCG CTGACCCGCG CGAAATCGTG TTCACTTCCG GAGCCACCGA GTCCGACAAC
CTGGCGATCA AAGGTGCTGC CAATTTCTAT CAAAAGAAAG GCAAGCACAT TATCACCAGC
AAAACCGAAC ACAAGGCCGT GCTGGACACC TGTCGCCAGC TCGAGCGTGA AGGCTTTGAA
GTGACCTATC TGGCACCTCA GAGCAACGGT ATTATCAGCC TGCAGGCCCT CGAAGCCGCG
ATGCGTGAGG ACACCATTCT GGTTTCTATC ATGCACGTGA ACAACGAAAT CGGCGTGGTG
CAGGATATCG AAGCTATCGG CGAAATGTGT CGTGCGCGCG GTATCATTTA TCACGTTGAT
GCTACCCAGA GCGTGGGCAA ATTGCCTATC GACCTGAGCA AGCTGAAAGT TGATCTGATG
TCTTTCTCCG GCCACAAAAT TTATGGCCCG AAAGGCATTG GTGCACTGTA CGTGCGTCGT
AAGCCACGTA TCCGTATCGA AGCCCAGATC CACGGCGGTG GTCATGAGCG CGGTATGCGT
TCCGGTACCC TGCCAGTACA CCAGATCGCC GGTATGGGCG AAGCCTACCG TATCGCCAAA
GAAGAAATGG CGTCGGAAAT GGCACGTCTG CGCACGCTGC GCGATCGTCT GTGGAACGGC
GTGAAAGATA TGGAAGAAGT GTATCTGAAC GGCTCGCTGG AGAACGGGGT GCCTAACATC
CTGAACGTCA GCTTCAACTA TGTTGAAGGC GAGTCGCTGA TCATGGCGCT GAAAGACCTG
GCCGTATCCT CGGGTTCTGC CTGTACCTCC GCCAGCCTTG AGCCATCTTA CGTGCTGCGC
GCGTTGGGCA TGACTGACGA ATTGGCGCAT AGCTCGATCC GTTTCTCTCT GGGGCGTTTC
ACCACAGAAG AAGAGATCGA TTACACCATT CAACTGGTGC GTAAATCCAT CGGCCGTCTG
CGTGACCTGT CTCCACTGTG GGACATGTTC AAGCAGGGCG TGGATATCAA CAGCATCGAA
TGGGCACATC ATTAA
 
Protein sequence
MKLPIYLDYS ATTPVDPRVA EKMMQFLTLD GTFGNPASRS HRFGWQAEEA VDIARNQIAE 
LVGADPREIV FTSGATESDN LAIKGAANFY QKKGKHIITS KTEHKAVLDT CRQLEREGFE
VTYLAPQSNG IISLQALEAA MREDTILVSI MHVNNEIGVV QDIEAIGEMC RARGIIYHVD
ATQSVGKLPI DLSKLKVDLM SFSGHKIYGP KGIGALYVRR KPRIRIEAQI HGGGHERGMR
SGTLPVHQIA GMGEAYRIAK EEMASEMARL RTLRDRLWNG VKDMEEVYLN GSLENGVPNI
LNVSFNYVEG ESLIMALKDL AVSSGSACTS ASLEPSYVLR ALGMTDELAH SSIRFSLGRF
TTEEEIDYTI QLVRKSIGRL RDLSPLWDMF KQGVDINSIE WAHH