| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3615 |
|---|
| Symbol | |
|---|
| ID | 5605891 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 3995797 |
|---|
| End bp | 4000788 |
|---|
| Gene Length | 4992 bp |
|---|
| Protein Length | 1663 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640939166 |
|---|
| Product | alpha-2-macroglobulin domain-containing protein |
|---|
| Protein accession | YP_001479839 |
|---|
| Protein GI | 157371850 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2373] Large extracellular alpha-helical protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.384695 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCAT ACCGTTCAGG GGCATTTGCA TCAGGCAAGA AGCTTTGTCA GGGGATCGCA
TTGGCGGGAG GCCTGCTGCT GCTGGCCGCC TGTGATGACG GCGGTAAAAA ACCAACCGCA
GCGCAGGCCG ATGCCCAGGC CAGCAGTGCC ACGCAGGCCA AACGGCCGGA TGCCGCCGCG
TTGGCGGCAT TGGCGAAACG CGACGCCGGT AAGCCGCTGA CGCTGCTTGA TGCCTCCGAA
CTGCAACTCG ACGGCGCCAG TGCCATGGTG CTGACGTTTT CTTTGCCGCT GGATCCGAGT
CAGGATTTCG CCGCGCGAGC GCATCTGGTC GACAGCGTTA GCGGTAAAAT CGACGGTGCC
TGGGAGCTGT CAGATAACCT GATGGAACTG CGGCTGCGTC ATCTGCAGCC CAACCGCAAG
CTGGTGCTGA CCCTCGAGAG CGGTCTGAAA GCGGTCAACG GTGCCGAACT GGGCAAACAG
CAAGAACAGA CTATTACCAC CCGCGACATC AAACCGAGCG TCGGCTTTGC CGGCAAAGGC
TCGCTGTTGC CGACCAAGCT GGCACAGGGG CTGCCGGTGA TGGCGTTAAA CGTCGATAAC
GTTGACGTTA ACTTCTTCCG GGTGAAGGCC GATGCCTTAC CTGCGTTCCT GGCAAACTGG
GAATATCGCA ATTCGCTCTC CAGTTGGGAG TCGGAAGAAC TGCTGAAAAT GGCCGATCTG
GTCTACAGCG GCCGCTTCGA TCTCAACCCG CAGCACAATA CCCGCGAACG CCTGCTATTA
CCGTTGAGTG GCATCGAGGC CTTACAACAG CCGGGTGTCT ACCTGGCGGT GATGCAACAG
GCCGGGCATT ACGGATATAC CAACCCGGCG ACCCTGTTCA CTCTCAGTGA TATCGGCGTT
TCGCTGCACA GTTATCATGA CCGTCTGGAC GTGTTTACCC AGGCTCTGGA TGGCGGTGCG
GCACTGGGCG CGGTTGAACT GCGCCTGCTG GATGAAAAAG GTCAAACGCT GACCCAGGGC
ACCACCGATA AGCAAGGGCA CGCCCAGTTG GTAAAAAGCG CCAAGGCGCG GTTGTTGCTG
GCGACCCAAC AGGGCCAGAC CAGCATGATC GATCTGTCGA CGCCGGCGCT GGATTTGGCT
GAGTTCGATA TTGCCGGGCC GGAAGGCTAC AGCAAGCAAT TCTTCGCCTT CGGCCCGCGT
GATCTTTACC GCCCCGGCGA AACGCTGATC GTTAACGGGC TGCTGCGTGA CGCCGACGGT
AAACCGCTGC CGGCCCAGCC GGTGAAGGTG GATATCGTCA AACCGGACGA TCAGGTGGCG
CGCAGTTTTG TCTGGCAGCC GCAGGATGGC TTGTATCAAT ATCAGTACCC AATCCCTGAA
GGCGGGCCGA CCGGAAACTG GTCGCTACGT TTCAATCTGG GCGATAACCA GCCGCGGCTT
TACAACTTCA AGGTCGAGGA TTTCCTGCCG GAACGCATGG CGCTAGACAT TACCGCCGAG
AAAACCCCGC TGCGCCCTGA CGCACAGTTA GTGTTCGACG TCACCGGCCG CTATCTCTAT
GGTGCCCCGG CCTCGGGTAA CCGTCTGCAG GGGCAGGTGT TCCTGCGGCC GCAGCGTGAG
GCGGTCAGCA GCCTGCCGGG CTATGAGTTT GGTTCGGTGA CGGAAGAAAG CCTGTCGCGC
AATATGGATG AATTCGACCA GGCGCTGGAT AACGCCGGCA AGGCGCAGGT GGCGGTGGAC
AGCAGTTGGG CAGAGGTAAA ATCGCCGTTG AAAGCCATCT TGCAGGCCAG CCTGCTGGAG
TCCGGTGGTC GCCCGGTAAC GCGCCGCGCC GAACAGGCGA TCTGGCCTGC CGATGCGCTG
CCCGGCATTC GACCTTTGTT CAACAAACAA CAGATTTATG ATTATCGTAG CAACAGCTAC
CAGGCCCAGC CGGTGGTGGA TGAAAACACC CAGGCCGGGT TTGATATTGT CTACGCCAAT
GCCGCTGGTG AAAAACTGGC CGTCAGCGGG CTGAAGGCTC GCCTGGTGCG TGAGCGTCGC
GACTACTACT GGCAGTGGTC AGAAGGCGAA GGCTGGCAGT CGTTGTACGA TAAGAAGGAT
CTGCCGCTGG CGGAACAGTC TATCGATATC GCCGCCAACG GCAGCACCAA GGTCAGTTTC
CCGGTGGAGT GGGGCGCATA TCGTATTGAG GTCGTGGATC CGCAGAGCAA TCTGATCAGC
AGCCTGCGTT TCTGGGCCGG TTACAGCTGG CAGGACAACA CTAATGGCAG TGGGGCTGTA
CGTCCGGACC AGGTGAAGCT GAAACTCGAC AAACCGGCCT ACCAACCGGG CGAGAAAGTG
AAGCTGCATA TCGAAGCGCC GGCCGCCGGC AAAGGCTATC TGCTGGTGGA GTCCAGCGAT
GGTCCGCTGT GGTGGCAGGA ACTGGATGTG CCGGCCAAGG GCGTTGATGT TGAAGTGCCA
ATCAATCAGG AGTGGAAACG CCACGATCTG TACCTCAGCG CATTGGTGAT CCGCCCGGGT
GACAAGCAAC AGCAGTCGAC GCCGAAACGG GCGGTGGGGC TGTTGCATCT GCCGCTGGTG
GATGAAGGAC GCAAACTGGC ACTGCAGCTG GACGCGCCGC AGCGTATGCG GCCGAACCAA
ATGCTGACGG TGAAGGTGAA GGCCGCCCAC AGCAGCGGTA AACCGCCACA GCAAATCAAC
GTGCTGCTTT CCGCGGTGGA CAGCGGCATC CTCAACATTA CCAATTACGC GACGCCGGAT
CCGTATCAGG CCTTCTTTGG TCGTAAGCGC TACAGCGCCG ATCAGTACGA TGTTTATGGT
CAACTGATTG AAGGCAAAGG GCGTTTGGCA AACCTGCGCT ACGGCGGCGA CGGTGATGAC
GAAGATGCGT TGTCGCGCGG CGGTAAAAAG CCGATCACCG CGGTTACCAT TGTTGCCCAG
CAGGCGCAGC CGGTTAAGCT GGATGCCAAC GGCGAAGGCG AAATTCAGAT TGCCATTCCT
GACTTCAACG GTGAATTACG ACTGATGGCG CAGGCGTGGA GCGATGAAGA CTTCGGCAAG
GCGGAAGGCA AGACCGTGGT TGCCGCACCG GTGGTGGCAG AGCTGGCGAC GCCACGCTTC
CTGGCCGGGG GCGACAGCAC CCAATTGGCG CTGGATGTCA GCAACCTGTC CGGCCAGCCG
CAGAAATTAA CCGTGAAACT GGCTTCCAGC GGGTTGGTGG CGCTGCAGGG GGCTGGCGAA
CAACAAGTCA GCCTGGCCAA CGGTGAACGC ACCACGCTGC AGATACCGGT GCAGGCGCTG
GCGGGCTTTG GTCAGGGCGA GGTCGCGCTG ACCCTCAGCG GTCTGGTGTT GCCGGGGGAA
ACGTTCAAGG ACTATCAGCA CAGTTGGAAG ATTGGCGTAA GGCCGGCTTA TCCAGCGCAA
ACCCGCCAGT TCGCCAGCGT GATCCACGCC GGTGAAAGCT GGAGTCTGCC GGCAGATGCC
GCCGCCGGGC TGGTTCAGGC GACGACCGAA GGGCAACTGC TGTTGACCAG CCGTCCGCCA
ATCAACCTGA CGCGTTACAT CAGCGAACTG TACGCCTATC CCTACGGCTG CCTGGAGCAG
ACGACCAGTG GGCTTTATCC GTCGCTGTAT ACCAACCGGG CGCAGCTCAG TGCGCTCGGG
ATCAAATCCG GCAGCGATGA AAGCCGCCGC AACAGTATCG ACGTTGGCAT CGAGCATCTG
CTCAGCATGC AGCGCTATAA CGGCGGTTTT GGTCTGTGGA GTCGCGACAG CCAGGAAGAG
TTCTGGCTGA CGGCCTACGC TACCGACTTC CTGTTCCGTG CCAGTGAACA GAACTACAGC
GTCCCGACCG ATGCGCTGAC GGCGGCCAAT AACCGTCTGC AGCGCTATTT GCAGGACCGT
AGTCAGATTG ACGTTGCTTC CACCCAGTAC CCGGACCACA CCCGTTTTGC GGTGCAGGCT
TATGCCGGCT TGGTATTGGC GCGTCAGCAA CAGGCACCGC TCGGGGCATT GCGACAGCTG
TTTGAGCGCC GTGCCGATGC TCGTTCGGGC CTGCCGCTGG TGCAACTTGG CGTAGCGCTG
AAGCTGATGG GCGATATGCC GCGTGCCAAT CAGGCAATTG AACAAGGGCT GGCAACGCAG
CGCAATGCCA AGGATTACTG GTTGGAAGAT TATGGCAGTC CACTGCGTGA TGACGCGATG
ATCCTGGCGC TGCTGACCGA AAATAACCTG CTGCCGGCAG AGCGCGACCA GCGCTTGCTA
ACGCTCTCTG AGCGTCTCAA CGGCGAACGT TATCTGTCTA CGCAGGAGAG CAATGCCCTG
TTCCTGGCGG CGCGCAATCT GATTGGCAGT GCTGAAACGC CATGGCAGGC ACAAACGGCG
CAGGGCAAAA CCCTGTCCGG CAGCCAGGCG CTGACGCAAA ATTTGTCCGC TGAGCAGTTG
GCGAGCGGTT TGCAGCTCAC CAATACCGGC AGCGGTACGC TGTACAGCCG GGTCGATTTG
GTCGGTTATC CGCAACAGGC GCCGCAGCCG CAGAGCAACG TGTTGAATAT CCGCCGCGAA
TTCCTGGGGC TGGACGGCAA ACCCGTGGAT CTGACCCAAC TGAAAAGCGG CCAGTTGATC
CTGGTGCACC TGGACGTCTG GGCCGATAAT CAGGTGCCGG ACGCGCTGGT GGTGGATCTG
CTGCCGGCCG GGCTGGAGCT GGAGAACCAA AATCTGGGGG ACAGCAGCGC CAGCCTGGGC
GAAAGCGCCA GTAGCGTGAC CGAACTGCTG CAGGACATGC AGCAGGCCGA TATCAAACAT
CAGGAGTTCC GTGACGATCG CTATGTGGCG GCGGTGAATA TCGACGGCTA CCGTCATACC
ACGCTGCTGT ATCTGGCTCG GGCCGTGACG CCAGGCACAT ATCTGGTTCC TGCACCGCAG
GTTGAGTCGA TGTATGTGCC TGCCTGGCGT GCGCTGGGCG CGACACCACA GCGGCTTGAA
ATTGCCAAAT GA
|
|---|
| Protein sequence | MKPYRSGAFA SGKKLCQGIA LAGGLLLLAA CDDGGKKPTA AQADAQASSA TQAKRPDAAA
LAALAKRDAG KPLTLLDASE LQLDGASAMV LTFSLPLDPS QDFAARAHLV DSVSGKIDGA
WELSDNLMEL RLRHLQPNRK LVLTLESGLK AVNGAELGKQ QEQTITTRDI KPSVGFAGKG
SLLPTKLAQG LPVMALNVDN VDVNFFRVKA DALPAFLANW EYRNSLSSWE SEELLKMADL
VYSGRFDLNP QHNTRERLLL PLSGIEALQQ PGVYLAVMQQ AGHYGYTNPA TLFTLSDIGV
SLHSYHDRLD VFTQALDGGA ALGAVELRLL DEKGQTLTQG TTDKQGHAQL VKSAKARLLL
ATQQGQTSMI DLSTPALDLA EFDIAGPEGY SKQFFAFGPR DLYRPGETLI VNGLLRDADG
KPLPAQPVKV DIVKPDDQVA RSFVWQPQDG LYQYQYPIPE GGPTGNWSLR FNLGDNQPRL
YNFKVEDFLP ERMALDITAE KTPLRPDAQL VFDVTGRYLY GAPASGNRLQ GQVFLRPQRE
AVSSLPGYEF GSVTEESLSR NMDEFDQALD NAGKAQVAVD SSWAEVKSPL KAILQASLLE
SGGRPVTRRA EQAIWPADAL PGIRPLFNKQ QIYDYRSNSY QAQPVVDENT QAGFDIVYAN
AAGEKLAVSG LKARLVRERR DYYWQWSEGE GWQSLYDKKD LPLAEQSIDI AANGSTKVSF
PVEWGAYRIE VVDPQSNLIS SLRFWAGYSW QDNTNGSGAV RPDQVKLKLD KPAYQPGEKV
KLHIEAPAAG KGYLLVESSD GPLWWQELDV PAKGVDVEVP INQEWKRHDL YLSALVIRPG
DKQQQSTPKR AVGLLHLPLV DEGRKLALQL DAPQRMRPNQ MLTVKVKAAH SSGKPPQQIN
VLLSAVDSGI LNITNYATPD PYQAFFGRKR YSADQYDVYG QLIEGKGRLA NLRYGGDGDD
EDALSRGGKK PITAVTIVAQ QAQPVKLDAN GEGEIQIAIP DFNGELRLMA QAWSDEDFGK
AEGKTVVAAP VVAELATPRF LAGGDSTQLA LDVSNLSGQP QKLTVKLASS GLVALQGAGE
QQVSLANGER TTLQIPVQAL AGFGQGEVAL TLSGLVLPGE TFKDYQHSWK IGVRPAYPAQ
TRQFASVIHA GESWSLPADA AAGLVQATTE GQLLLTSRPP INLTRYISEL YAYPYGCLEQ
TTSGLYPSLY TNRAQLSALG IKSGSDESRR NSIDVGIEHL LSMQRYNGGF GLWSRDSQEE
FWLTAYATDF LFRASEQNYS VPTDALTAAN NRLQRYLQDR SQIDVASTQY PDHTRFAVQA
YAGLVLARQQ QAPLGALRQL FERRADARSG LPLVQLGVAL KLMGDMPRAN QAIEQGLATQ
RNAKDYWLED YGSPLRDDAM ILALLTENNL LPAERDQRLL TLSERLNGER YLSTQESNAL
FLAARNLIGS AETPWQAQTA QGKTLSGSQA LTQNLSAEQL ASGLQLTNTG SGTLYSRVDL
VGYPQQAPQP QSNVLNIRRE FLGLDGKPVD LTQLKSGQLI LVHLDVWADN QVPDALVVDL
LPAGLELENQ NLGDSSASLG ESASSVTELL QDMQQADIKH QEFRDDRYVA AVNIDGYRHT
TLLYLARAVT PGTYLVPAPQ VESMYVPAWR ALGATPQRLE IAK
|
|---|
| |