Gene Spro_3583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3583 
Symbol 
ID5605691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3958225 
End bp3959460 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content60% 
IMG OID640939134 
Productmajor facilitator transporter 
Protein accessionYP_001479807 
Protein GI157371818 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.249209 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGATA AAACGCTGGA TCCGATTTGT GCCGCGCAGG ACGGAGCGCT GAGTCGCCTG 
CCTGCGTCGC TGGTGTTATT GCTGGCGGGA GCCAGTGCCT TTAGCGTGGC GAATGTGTAT
TACGCACAAC CTTTACTGGA CGCCATTGCT CAGGATTTTC ATATCAGCCT GGCGTCGGTG
GGCATGGTGA TCACCGTCAC TCAGTTAGGC TGCGCATTGG CATTGTTGCT GGTGGTGCCG
TTGGGCGATC GGGTTAATCG TCACCGGCTG CTGGCGGTTC AGCAACTGCT GCTGATTACC
GCACTTTGTG TGGTCGGTTG GGCGAACAGC AGCCTGTTAT TACTGGTCGG CATGCTGCTG
GTGGGGTTAC TGGGTACCGC CATGACCCAG GGATTGGTCG CCTTCGCCGC TACATTGGCA
GCGCCGCATG AGCGGGGACG GGTAGTGGGC GCCGCGCAAG GCGGTGTGGT TCTCGGGTTG
TTATTGGCGC GCACGCTTTC CGGCGCAATG GCGGATATCG GTGGCTGGCG CGCGGTTTAC
TTTTTCTCTG CGGCGGTAAC CCTGCTCCTG TTGCCGGTGC TTGCGCGTCT GTTGCCCGTC
CCGGACATAG CGCCTTCAAC ACTCAGTTAT CCGGCGCTGT TGCGATCAAT GCTGACGTTG
CTGTGGCGCG ATCGCACGCT ACAGATCCGC GGCATGCTGG CGCTGCTGAT GTTTGCGGCA
TTCAGCATTT TCTGGAGTGC CCTGGTTCTG CCACTCAGTC AGGCGCCGTT TAATTTTTCA
CATTCGGTGA TTGGTGCCTT TGGTCTGGTG GGGTCGGTGG GAGCGCTGGC GGCGGTTCGT
GCCGGACATT TGGCCGATCG CGGTCTGGGG CAGTTGGCAA CAGGTATCTG TCTGTTGCTG
TTGGTGCTGG CCTGGTTGCC GCTCGGCCTG CTGAGTTACG GGCTGGGATG GTTGATTATG
GGCATTGTGC TGCTCGATCT GGCCGGACAG GCCATTCACG TGTTGAATCA GAGTCTGATT
TTCAGCGCCC ATCCGCAGGC TCATAGCCGG TTAGTCGGCT GCTACATGCT GTTCTACGCG
GTGGGTAGCG GGCTGGGTGC CTTTGCCAGT ACCCACGTAT TCGCTCTGGC GGGCTGGTAC
GGCGTGTGTT GGCTGGGGGC GAGCGTCAGC CTGGCGGCCT TGTTGTTCTG GGGGCTGACG
CTGCGTGCCA TGCCAGCCTC AAATGCGGCG CATTAG
 
Protein sequence
MSDKTLDPIC AAQDGALSRL PASLVLLLAG ASAFSVANVY YAQPLLDAIA QDFHISLASV 
GMVITVTQLG CALALLLVVP LGDRVNRHRL LAVQQLLLIT ALCVVGWANS SLLLLVGMLL
VGLLGTAMTQ GLVAFAATLA APHERGRVVG AAQGGVVLGL LLARTLSGAM ADIGGWRAVY
FFSAAVTLLL LPVLARLLPV PDIAPSTLSY PALLRSMLTL LWRDRTLQIR GMLALLMFAA
FSIFWSALVL PLSQAPFNFS HSVIGAFGLV GSVGALAAVR AGHLADRGLG QLATGICLLL
LVLAWLPLGL LSYGLGWLIM GIVLLDLAGQ AIHVLNQSLI FSAHPQAHSR LVGCYMLFYA
VGSGLGAFAS THVFALAGWY GVCWLGASVS LAALLFWGLT LRAMPASNAA H