Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_3583 |
Symbol | |
ID | 5605691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 3958225 |
End bp | 3959460 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640939134 |
Product | major facilitator transporter |
Protein accession | YP_001479807 |
Protein GI | 157371818 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.249209 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGATA AAACGCTGGA TCCGATTTGT GCCGCGCAGG ACGGAGCGCT GAGTCGCCTG CCTGCGTCGC TGGTGTTATT GCTGGCGGGA GCCAGTGCCT TTAGCGTGGC GAATGTGTAT TACGCACAAC CTTTACTGGA CGCCATTGCT CAGGATTTTC ATATCAGCCT GGCGTCGGTG GGCATGGTGA TCACCGTCAC TCAGTTAGGC TGCGCATTGG CATTGTTGCT GGTGGTGCCG TTGGGCGATC GGGTTAATCG TCACCGGCTG CTGGCGGTTC AGCAACTGCT GCTGATTACC GCACTTTGTG TGGTCGGTTG GGCGAACAGC AGCCTGTTAT TACTGGTCGG CATGCTGCTG GTGGGGTTAC TGGGTACCGC CATGACCCAG GGATTGGTCG CCTTCGCCGC TACATTGGCA GCGCCGCATG AGCGGGGACG GGTAGTGGGC GCCGCGCAAG GCGGTGTGGT TCTCGGGTTG TTATTGGCGC GCACGCTTTC CGGCGCAATG GCGGATATCG GTGGCTGGCG CGCGGTTTAC TTTTTCTCTG CGGCGGTAAC CCTGCTCCTG TTGCCGGTGC TTGCGCGTCT GTTGCCCGTC CCGGACATAG CGCCTTCAAC ACTCAGTTAT CCGGCGCTGT TGCGATCAAT GCTGACGTTG CTGTGGCGCG ATCGCACGCT ACAGATCCGC GGCATGCTGG CGCTGCTGAT GTTTGCGGCA TTCAGCATTT TCTGGAGTGC CCTGGTTCTG CCACTCAGTC AGGCGCCGTT TAATTTTTCA CATTCGGTGA TTGGTGCCTT TGGTCTGGTG GGGTCGGTGG GAGCGCTGGC GGCGGTTCGT GCCGGACATT TGGCCGATCG CGGTCTGGGG CAGTTGGCAA CAGGTATCTG TCTGTTGCTG TTGGTGCTGG CCTGGTTGCC GCTCGGCCTG CTGAGTTACG GGCTGGGATG GTTGATTATG GGCATTGTGC TGCTCGATCT GGCCGGACAG GCCATTCACG TGTTGAATCA GAGTCTGATT TTCAGCGCCC ATCCGCAGGC TCATAGCCGG TTAGTCGGCT GCTACATGCT GTTCTACGCG GTGGGTAGCG GGCTGGGTGC CTTTGCCAGT ACCCACGTAT TCGCTCTGGC GGGCTGGTAC GGCGTGTGTT GGCTGGGGGC GAGCGTCAGC CTGGCGGCCT TGTTGTTCTG GGGGCTGACG CTGCGTGCCA TGCCAGCCTC AAATGCGGCG CATTAG
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Protein sequence | MSDKTLDPIC AAQDGALSRL PASLVLLLAG ASAFSVANVY YAQPLLDAIA QDFHISLASV GMVITVTQLG CALALLLVVP LGDRVNRHRL LAVQQLLLIT ALCVVGWANS SLLLLVGMLL VGLLGTAMTQ GLVAFAATLA APHERGRVVG AAQGGVVLGL LLARTLSGAM ADIGGWRAVY FFSAAVTLLL LPVLARLLPV PDIAPSTLSY PALLRSMLTL LWRDRTLQIR GMLALLMFAA FSIFWSALVL PLSQAPFNFS HSVIGAFGLV GSVGALAAVR AGHLADRGLG QLATGICLLL LVLAWLPLGL LSYGLGWLIM GIVLLDLAGQ AIHVLNQSLI FSAHPQAHSR LVGCYMLFYA VGSGLGAFAS THVFALAGWY GVCWLGASVS LAALLFWGLT LRAMPASNAA H
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