Gene Spro_3509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3509 
Symbol 
ID5605108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3885061 
End bp3885942 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content55% 
IMG OID640939062 
Productdihydrodipicolinate synthase 
Protein accessionYP_001479735 
Protein GI157371746 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTACGG GAAGTATAGT TGCACTGGTT ACGCCGATGG ACGACACAGG TGCTGTCGAT 
CGCGCGAGCC TAAAAAAATT GATTGATTAT CATGTAGCCA GTGGAACTGC GGCCATCGTT
TCCGTAGGGA CTACCGGCGA GTCTGCAACG CTTGCCCATG ACGAGCACGT TGACGTGGTA
TTGCAGACGC TGGAACTGGC CGCAGGCCGT ATTCCGGTGA TCGCCGGTAC CGGCGCCAAC
GCCACCGCCG AAGCCATTTC GCTGACCCAG CGCTTCGAAA ATAGCGGCGT AGTGGGTTGC
CTGACGGTCA CGCCTTACTA CAATAAACCG ACTCAGGAAG GGCTGTATCA GCACTTCAAG
GCCATTGCCG AAAGCACCGC ACTGCCACAA ATCCTCTATA ACGTGCCTTC TCGCACCGGG
TGTGACATGC TGCCGCCGAC GATTGCGCGC CTGGCAAAAA TCAAGAATAT TGTTGCTGTT
AAAGAGGCAA CAGGGAACTT AAGTCGTGTA AGTCAGATCC AAGTGCTGGT TGATGATGAA
GATTTCATTT TGCTGAGCGG CGATGACGCC AGCGGTCTGG ATTTCATGCA ACTGGGTGGC
AAGGGCGTGA TTTCCGTGAC GGCCAACGTG GCCGCACGTG AAATGGCGCA ACTTTGCGCG
CTGGCAGCAC AGGGCAACTT TGCTGAGGCA CGCCGCTTAA ATCAACGCTT GATGCCGTTG
CATCAGGATT TGTTTGTAGA AGCAAACCCA ATTCCGGTGA AATGGGCCTG TAAGGCATTG
GGATTGATGG CAACCGATAC GATGCGTCTG CCTATGACGC CGTTGACCGA CGCTGCCCGT
CCGGTAGTGG AACGCGCGTT GAAAAGCGCC GGTTTGCTGT AA
 
Protein sequence
MFTGSIVALV TPMDDTGAVD RASLKKLIDY HVASGTAAIV SVGTTGESAT LAHDEHVDVV 
LQTLELAAGR IPVIAGTGAN ATAEAISLTQ RFENSGVVGC LTVTPYYNKP TQEGLYQHFK
AIAESTALPQ ILYNVPSRTG CDMLPPTIAR LAKIKNIVAV KEATGNLSRV SQIQVLVDDE
DFILLSGDDA SGLDFMQLGG KGVISVTANV AAREMAQLCA LAAQGNFAEA RRLNQRLMPL
HQDLFVEANP IPVKWACKAL GLMATDTMRL PMTPLTDAAR PVVERALKSA GLL