| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3501 |
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| Symbol | |
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| ID | 5605029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 3876960 |
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| End bp | 3878087 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640939054 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_001479727 |
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| Protein GI | 157371738 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTGCC CGGTTATCGA ACTGGCTCAA CAGCTGATCA AGCGCCCGTC GCTCAGCCCG
CACGATGAAG GCTGTCAGGC ACTGATGATT GAACGTCTGG AGGCCATTGG TTTTACCGTT
GAGCCGATGC CTTTCGGCGA TACCCTGAAT TTCTGGGCCT GGCGTGGCGA AGGCCAAACC
CTGGCGTTTG CCGGCCACAC CGACGTCGTG CCAACCGGCG ACGAAAAACG CTGGGACAAC
CCACCGTTTG AGCCGACCAT CCGCGACGGC ATGCTGTATG GCCGTGGCGC GGCAGACATG
AAAGGCTCGC TGGCGGCAAT GGTCGTGGCG GCCGAACGTT TCGTCGCGGC CAATCCGCAT
CATCAGGGCC GTTTGGCATT CCTGATCACC TCCGATGAAG AAGCCAGCGC GACCCATGGC
ACGGTGAAAG TGGTGGAAGC GCTGATGGCG CGCAATGAGC GCCTGGATTA TTGCCTGGTC
GGTGAGCCGT CCAGTACCGA ACGCGTCGGC GACGTGGTGA AGAACGGGCG TCGCGGCTCA
ATCACCGCCA ACCTGCACAT TCACGGCATT CAGGGCCACG TTGCCTATCC ACATCTGGCG
GATAACCCGG TGCACCGCGC CATGCCGGCC CTCAATGAGC TGGTGGCGAT CGAGTGGGAT
CGCGGCAATG AATTCTTCCC GCCGACCAGC ATGCAGATTG CTAACGTGCA GGCCGGTACC
GGCAGCAACA ACGTGATCCC GGGCGAGATG TTCGTTCAGT TCAACTTCCG CTTTAGTACC
GAATCGACCG ACGCGACGAT CAAACAGCGC GTAGAGGAAC TGCTTGAGCG CCATCAGTTG
AACTACAGCA TCGAATGGCG CCTGTCGGGC CAGCCGTTTC TGACTGCACG TGGCGCGCTG
GTGGATGCGG TGGTTAACGC CGTCGAACAC TACTCTGAGC TGACGCCGCA GTTGCTGACC
ACCGGGGGCA CCTCCGACGG CCGCTTTATC GCCCAGATGG GCGCGCAGGT GGTTGAGCTG
GGGCCAGTCA ACGCGACTAT CCATAAGGTC AACGAATGCG TACACGCGGC CGATTTGCAA
CTACTGAGCC GCATGTACCA GCGCATCATG GAGCAATTGG TCGCATGA
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| Protein sequence | MTCPVIELAQ QLIKRPSLSP HDEGCQALMI ERLEAIGFTV EPMPFGDTLN FWAWRGEGQT
LAFAGHTDVV PTGDEKRWDN PPFEPTIRDG MLYGRGAADM KGSLAAMVVA AERFVAANPH
HQGRLAFLIT SDEEASATHG TVKVVEALMA RNERLDYCLV GEPSSTERVG DVVKNGRRGS
ITANLHIHGI QGHVAYPHLA DNPVHRAMPA LNELVAIEWD RGNEFFPPTS MQIANVQAGT
GSNNVIPGEM FVQFNFRFST ESTDATIKQR VEELLERHQL NYSIEWRLSG QPFLTARGAL
VDAVVNAVEH YSELTPQLLT TGGTSDGRFI AQMGAQVVEL GPVNATIHKV NECVHAADLQ
LLSRMYQRIM EQLVA
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