Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_3441 |
Symbol | |
ID | 5604577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 3811269 |
End bp | 3812189 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640938994 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001479667 |
Protein GI | 157371678 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.985803 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000545962 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATTACT CGATTAAACA ACTCAAAGTC TTTGTCGCTA TTGCCCGGCA CCGCAGTTTC AGCCGGGCGG GCGAGGCCAT TGGGCTGACG CAGTCGGCGG TCAGCCACAG CGTGAAAGAG CTGGAGGCGG AGGTCGGCGT TCGCCTGCTC GATCGCACCA CCCGTGAAGT GTTGCTGACC GACGCCGGGC AACGGCTGGC CAACCGGGTT GAACGTTTAC TGGATGAGTT GCAGTCGTCA TTGTTGGATG CGCGCAGCTT TGGCGTGCTA CGCAGCGGTA CGGTGCGGGT GGCATCGAGC CAGACCATCT CCGCGCACCT GATGCCGCAG TGCATTGCAG CCGGGGAAAA GCAGTATCCG GATATCCGCA TCATGCTGCG TGACCAGGCG CAGCAGCAGG TGCTGCACAG CATTCGCAAC GCCGAGGTCG ATTTTGGCAT CGTGGTCGAT CCGGTGCAGG CGTTGGATCT GGACTGTGAA CCGATCCTGC ACGAACCTTT CCTGTTGCTG TGCCGTAACG ATCACCCGTT TGCTGAATTG CCCGAAGTGC ACTGGTCGGC GCTGAACGGC AGCCGTTTGG TGTTGCAGGA TTATGCTTCA GGTAGTCGGC CACTGATTGA CAGCGCGCTG CGCCAACAAG GGGTGGAAGC GACGGTAGTG CAGGAGATCG GCCACCCGGC TACGCTGTTT CCTATGGTGG CCGCGGGTAT CGGCATCAGT ATTTTCCCCG CGCTGGCCTT ACCCTTACCG GAGGGCGGCC AATTGAAGGT TCGCCGATTG GTGCCGGAAA TCAACCGTGC GCTGATGCTG GTACGGCGTA AAAACCGCTC GCTGACACCG GCAGCAGAGG TCATCTGGCA GGTGGTGGGG CAGCAGGCGG CCTTGCTGCA ACAACAGCGT CAGCGGCAGG CAGATTACTG A
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Protein sequence | MNYSIKQLKV FVAIARHRSF SRAGEAIGLT QSAVSHSVKE LEAEVGVRLL DRTTREVLLT DAGQRLANRV ERLLDELQSS LLDARSFGVL RSGTVRVASS QTISAHLMPQ CIAAGEKQYP DIRIMLRDQA QQQVLHSIRN AEVDFGIVVD PVQALDLDCE PILHEPFLLL CRNDHPFAEL PEVHWSALNG SRLVLQDYAS GSRPLIDSAL RQQGVEATVV QEIGHPATLF PMVAAGIGIS IFPALALPLP EGGQLKVRRL VPEINRALML VRRKNRSLTP AAEVIWQVVG QQAALLQQQR QRQADY
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