Gene Spro_3416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3416 
Symbol 
ID5604187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3778158 
End bp3779345 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content51% 
IMG OID640938963 
Productnucleoside transporter 
Protein accessionYP_001479642 
Protein GI157371653 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1972] Nucleoside permease 
TIGRFAM ID[TIGR00804] nucleoside transporter 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000564336 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCATA TTGCGCACTT CGCGTTGGCG TTGGTGGTGG TCACGATCCT GGCACTTTTA 
GTATGCCGCG ATCGTAAAAG CATCCGCATT CGCTACGTTA TTCAACTGTT GGTTATTGAA
GTACTGCTGG CCTATTTTTT CCTGCATTCG GAAGCGGGTT TAGGCTTTGT AAAAGGATTC
GCAGCGCTGT TTGACAAGCT GCTCGGGTTT GCTGGGCAAG GGACTGAGTT TGTATTCGGC
GGTATGGGCG ACAAAGGTTT GGCCTTCTTC TTCCTGAAGG TACTGTGCCC GATCGTCTTC
ATCTCCGCGC TGATCGGTAT TCTGCAATAC ATTAAAGTAC TGCCGTTTGT CATCCGCATC
ATTGGTACCG TGCTGTCAAA AGTTAACGGT ATGGGCAAGC TGGAATCGTT CAACGCCGTC
AGCTCGCTGA TCCTGGGCCA GTCTGAAAAC TTCATTGCCT ATAAAGATAT TCTGGGCAAG
ATGTCTGAAA AGCGCATGTA CACCATGGCG GCGACCGCGA TGTCTACGGT TTCCATGTCC
ATCGTCGGCG CTTACATGAC CATGCTGGAC GCCAAATTTG TGGTCGCGGC ACTGGTACTG
AACATGTTCA GCACCTTTAT CGTGCTGTCA TTGGTCAACC CGTATGACAC CAGTAAAGAA
GAAGAACTGC ACCTGGGCAA TTTGCACGAA GGCCAGAGCT TCTTCGAAAT GCTGGGTGAA
TACATTCTGG CTGGTTTTAA AGTAGCTATT ATCGTTGCTG CGATGCTGAT CGGCTTTATC
GCCCTGATCG CCGCGCTCAA CGGCCTGTTC AGCGCCATCT TCGGCCTGAG CTTCCAGGAA
ATTCTGGGCT ACTTCTTCTA TCCATTCGCC TGGATTATGG GTATTCCTAA GCACGAAGCG
TTGCAGGTGG GTAGCATCAT GGCAACCAAA CTGGTATCCA ACGAATTCGT GGCGATGATG
GAACTGCAGA AAATCTCTGC TGAACTCTCT CCTCGCAGCA TGGGTATTCT GTCGGTGTTC
CTGGTTTCCT TCGCCAACTT CTCTTCCATC GGCATCGTTG CCGGTGCGAT TAAAGGGCTG
AACGAGCATC AGGGCAACGT GGTTTCTCGC TTTGGTCTGA AGCTGGTTTA CGGTTCAACG
CTGGTCAGCA TCCTGTCTGC GTCCATCGCA GGCCTGGTTC TGGGCTAA
 
Protein sequence
MSHIAHFALA LVVVTILALL VCRDRKSIRI RYVIQLLVIE VLLAYFFLHS EAGLGFVKGF 
AALFDKLLGF AGQGTEFVFG GMGDKGLAFF FLKVLCPIVF ISALIGILQY IKVLPFVIRI
IGTVLSKVNG MGKLESFNAV SSLILGQSEN FIAYKDILGK MSEKRMYTMA ATAMSTVSMS
IVGAYMTMLD AKFVVAALVL NMFSTFIVLS LVNPYDTSKE EELHLGNLHE GQSFFEMLGE
YILAGFKVAI IVAAMLIGFI ALIAALNGLF SAIFGLSFQE ILGYFFYPFA WIMGIPKHEA
LQVGSIMATK LVSNEFVAMM ELQKISAELS PRSMGILSVF LVSFANFSSI GIVAGAIKGL
NEHQGNVVSR FGLKLVYGST LVSILSASIA GLVLG