| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3412 |
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| Symbol | |
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| ID | 5604101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | - |
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| Start bp | 3772794 |
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| End bp | 3774455 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640938959 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_001479638 |
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| Protein GI | 157371649 |
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| COG category | [G] Carbohydrate transport and metabolism
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3961] Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes |
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| TIGRFAM ID | [TIGR03393] indolepyruvate decarboxylase, Erwinia family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACGA CCTATAGAGT GGCTGATTAC CTACTCGATC GTTTGGCTCA GATCGGCATC
CGACATTTCT TTGGCGTGCC GGGTGACTAC AACCTGCAGT TTCTCGATCA TGTCATCAGT
CATCCGCAAA TTACCTGGGT AGGCTGCGCT AATGAACTCA ATGCTGCCTA TGCCGCAGAT
GGTTACGCAC GCTGTAAACC GGCCGCCGCT TTATTGACCA CCTTTGGCGT GGGCGAACTG
AGCGCGCTCA ACGGTATTGC CGGCAGCTAC GCCGAATATC TGCCGGTGAT CCACGTGGTG
GGTGCGCCAA CGTTACGCGC GCAGCGGGCC GGTGATTTGT TGCACCATTC GCTGGGGGAC
GGTGACTTTG GCCACTTTGC CCGTATGGCG AAAGAGGTGA CCGTCGCGCA GGCCAGCCTA
ACCCCCGACA ACGCCGAGGC GGAAATCGAC CGCCTGCTGA CCATCGCGCT GTTTGAGCAC
CGCCCGGTCT ATATAGTGTT ACCCAGTGAG GTGGCGGAAG CACCGTTGGC ATCCCGGCCT
GCGCCGCTGG TGTTACGGCA GGCGCATCTT TCCCAGGCGT CGCTGCAAGC TTTTATCGCC
GCCGCGCGGC AAATGCTGTT ACCGGCCAGG CGGGTTTCCC TGCTGGCGGA TTTTTTGGCG
GAACGTTTTG GGGCGGAAAA AGTGCTGGAA CAATGGATGA ATGAGGTTGA GATACCGCAT
TCAACCATGC TGCTGGGCAA GAGTGTATTG GATGAAACCC ATGCCTGCTT TACCGGCACT
TACGCCGGTG CCGCCAGCGA TCCACAGGTG AAGCAACTGA TTGAAGGGGC CGATGTGGTG
ATTAACGTCG GCGTGCGCTT TACCGATACC ATTACCGCCG GTTTCAGCCA TCATCTGCCT
GCGGAAAAAT GCATTGATCT TCAGCCGTTT GAAGCACGGG TAGGGCAGCA GGTATTTAGC
CAAATCCCGC TGCGTGATGC GGTAATAGCA CTGCACCAGT TGACGCTATC GTTGGCAAAA
CAATGGCCAG TACCGGCCAT TAAACGCCCG ACGTTGCCCG ATCCGAACGG CAGCGGCCTG
GATCAGCACG GTTTTTGGCA ACAGATACAG GACTTTCTGC GCCCGGGCGA TATTTTGATC
GCCGAACAGG GCACCGCCTG CTTTGGTGCT GCGGCTCTTG GCCTGCCGCA AGGCTGCCGG
TTTATCGTCC AGTCGCTGTG GGGCTCTATC GGTTACACCC TGCCGGCGGC GTTCGGTGCA
CAAACGGCGG AGCCGGATCG GCGGGTGGTG TTGCTGATCG GCGATGGTTC GGCTCAGCTC
ACGGCGCAGG AACTGGGTTC GATGCTGCGT GATGGACAAA AGCCGGTGAT CTTCCTGCTC
AATAATGAGG GGTATACCGT TGAACGGGCC ATTCACGGCC CGCAACAGCG TTACAACGAC
ATCGCCCAGT GGAACTGGAC GCAGTTACCG CAGGCGCTGG CGGGCGAGCA TCAGGTGAAA
ACGCTGCGGG TCGCCGATCC GCAGCAGTTG CGTCAGGCGC TGAAAGAAGT TGGCGACAGC
CCACAACTGG CCTTTGTGGA AGTGATGCTG CCGAAGATGG ATATTCCCGA ACTGCTCGAT
AGCGTTTCAC GCGCCATTCA CTCGCGTAAC GCGGCCGCCT GA
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| Protein sequence | MNTTYRVADY LLDRLAQIGI RHFFGVPGDY NLQFLDHVIS HPQITWVGCA NELNAAYAAD
GYARCKPAAA LLTTFGVGEL SALNGIAGSY AEYLPVIHVV GAPTLRAQRA GDLLHHSLGD
GDFGHFARMA KEVTVAQASL TPDNAEAEID RLLTIALFEH RPVYIVLPSE VAEAPLASRP
APLVLRQAHL SQASLQAFIA AARQMLLPAR RVSLLADFLA ERFGAEKVLE QWMNEVEIPH
STMLLGKSVL DETHACFTGT YAGAASDPQV KQLIEGADVV INVGVRFTDT ITAGFSHHLP
AEKCIDLQPF EARVGQQVFS QIPLRDAVIA LHQLTLSLAK QWPVPAIKRP TLPDPNGSGL
DQHGFWQQIQ DFLRPGDILI AEQGTACFGA AALGLPQGCR FIVQSLWGSI GYTLPAAFGA
QTAEPDRRVV LLIGDGSAQL TAQELGSMLR DGQKPVIFLL NNEGYTVERA IHGPQQRYND
IAQWNWTQLP QALAGEHQVK TLRVADPQQL RQALKEVGDS PQLAFVEVML PKMDIPELLD
SVSRAIHSRN AAA
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