Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_3406 |
Symbol | |
ID | 5603957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 3766777 |
End bp | 3768003 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640938953 |
Product | major facilitator transporter |
Protein accession | YP_001479632 |
Protein GI | 157371643 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00890] Oxalate/Formate Antiporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.913918 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACACCA AACCGGCAAA TCGCAGCTTA ATCGTTCTGG GTACCATCAT CTGCCAGATG GGTCTCGGTA CTATCTATAC CTGGAGTCTG TTCAACCAGC CGTTGGTCGA CAAGTTCCAC TGGGGCCTAG CTGACGTCGC CACCACCTTC TCCATCACCA GCTTCTTCCT GGCCTTCGCC ACTTTATTTG CCGGCAAACT GCAGGAACGC TTCGGGATCC GTAACCTGAC CCTGTGCTCT GGCATCCTGG TGGGTCTGGG CCTGATTGCC AGCGCCTACG TCAGCTCACT GAATATGGTT TATCTGCTGG CCGGGGTGGT GGTCGGTTTC GCGGTAGGTA TCGCTTATAT CTCTACCCTG TCCAACCTGA TCAAATGGTT CCCGGCCAAC AAAGGGCTGA TCTCCGGTAT CTCGGTGGGG GCTTTCGGTA GCGGTAGCCT GCTGTTCAAA TACGTTAACG CCGCGTTGAT TGCCGACGTT GGTGTGTCCT CAGCCTTCTT CTACTGGGGT GCCATTGTGA TGGCGCTGAT TGTGCTGGGC TCCCTGCTGT TGAAAGAGCC GGTACTGGTG AGCCAGTCTG CACAGCAAGG GACCAGCGGC CTGGGCAATG ACTTCAGCGT CCGCCAAATG CTGGCGACCA AAGAAGCTTA CCTGCTGTTC ATCATCTTCT TCGCGGCTTG TATGAGTGGT CTGTATCTGA TTGGTATCGT GAAAGACATG GGCGTACAAC TGGCTGGGAT GGACCTGGCT ACCGCCGCCA ACACCGTTTC CGCCGTCGCC ATCTTTAACA CCGCAGGCCG TATTATTCTG GGTACGCTGT CCGATAAAGT GGGCCGCATG CGCGTCATCA GCTTTACCAT GCTGGTCACC GTTCTGGCGA TTGTGGCGCT GAGCTTCCTG ACTCTGAACC ACACCCTGTT CTTCATCTGC GTCGGTGCCG TCGCCTTCTG CTTCGGTGGC AACATCACCG TATTCCCAGC GATTGTCGGT GACTTCTTCG GCCTGAAAAA CCACAGCAAA AACTACGGCA TCATCTATCA GGGCTTCGGT CTGGGCGCAC TGGCCGGTTC GTTTGTCGCC AAATACTTCG GCGGCTTCCA TGCGACCTTC ATCGTGATTG GCGTGCTGTC AGTGGCTTCT CTGATAATCA CCCTGTTCAT CAAGGCACCG AAAGCGGTAG CGCAGGAAGA AGAACACTTC TCGCAGGCGC AGCTGGCAAA AGCCTAA
|
Protein sequence | MNTKPANRSL IVLGTIICQM GLGTIYTWSL FNQPLVDKFH WGLADVATTF SITSFFLAFA TLFAGKLQER FGIRNLTLCS GILVGLGLIA SAYVSSLNMV YLLAGVVVGF AVGIAYISTL SNLIKWFPAN KGLISGISVG AFGSGSLLFK YVNAALIADV GVSSAFFYWG AIVMALIVLG SLLLKEPVLV SQSAQQGTSG LGNDFSVRQM LATKEAYLLF IIFFAACMSG LYLIGIVKDM GVQLAGMDLA TAANTVSAVA IFNTAGRIIL GTLSDKVGRM RVISFTMLVT VLAIVALSFL TLNHTLFFIC VGAVAFCFGG NITVFPAIVG DFFGLKNHSK NYGIIYQGFG LGALAGSFVA KYFGGFHATF IVIGVLSVAS LIITLFIKAP KAVAQEEEHF SQAQLAKA
|
| |