| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3333 |
|---|
| Symbol | |
|---|
| ID | 5602537 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 3688715 |
|---|
| End bp | 3689377 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640938879 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001479559 |
|---|
| Protein GI | 157371570 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0586] Uncharacterized membrane-associated protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00119993 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACATCA TCAAGTTTGT AATTGATTTT ATTTTGCATA TTGACGTGCA TCTGGCCGAG
CTGGTGGCGC AATACGGTAT GTGGGTGTAC GCCATTTTGT TCCTGATCCT GTTTTGCGAA
ACCGGGCTGG TGGTGACGCC GTTCCTGCCG GGTGATTCTC TGCTGTTTGT TGCCGGTGCG
CTGGCGGCCT TGCCGACCAA CGATCTGAAC GTACATACCA TGGTTGCGCT GATGATAGGC
GCGGCGATAC TGGGCGACGC GGTGAACTAC ACCATTGGGC GGCTGTTCGG GGAAAAGCTG
TTCAGTAACC CGAATTCGAA AATTTTCCGC CGTAGCTACC TGGATAAAAC CCACCAGTTT
TATGAAAAAC ACGGCGGGAA AACGATTATT CTGGCGCGAT TTGTGCCGAT CGTGCGTACT
TTTGCGCCGT TCGTCGCCGG TATGGGGCAT ATGTCCTATC GCCATTTTGC AGCCTACAAC
GTGATTGGTG CACTGGTTTG GGTGCTGCTC TTCACTTATG CTGGCTACCT CTTCGGCGAT
CTGCCGATCG TGCAGGAAAA CCTGAAACTG TTGATCGTGG CTATCATCAT TGTTTCAATT
CTGCCGGGCA TCATTGAAAT TTGGCGCCAT AAGCGCGCGG CTGCCCGCCA GCAAAAACAG
TAA
|
|---|
| Protein sequence | MDIIKFVIDF ILHIDVHLAE LVAQYGMWVY AILFLILFCE TGLVVTPFLP GDSLLFVAGA
LAALPTNDLN VHTMVALMIG AAILGDAVNY TIGRLFGEKL FSNPNSKIFR RSYLDKTHQF
YEKHGGKTII LARFVPIVRT FAPFVAGMGH MSYRHFAAYN VIGALVWVLL FTYAGYLFGD
LPIVQENLKL LIVAIIIVSI LPGIIEIWRH KRAAARQQKQ
|
|---|
| |