Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_3312 |
Symbol | |
ID | 5603237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 3667987 |
End bp | 3669819 |
Gene Length | 1833 bp |
Protein Length | 610 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640938858 |
Product | citrate transporter |
Protein accession | YP_001479538 |
Protein GI | 157371549 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0471] Di- and tricarboxylate transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00101097 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACAGCG AATTACTGTG GGTGCTAAGT TTACTGTTGA TTGCCATAGT GCTGTTCACC ACCAACAAAC TGCGTATGGA CGTAGTGGCG TTGCTGGTGA TCATTGCCTT TGTGCTGAGC GGCACGCTGA CCCTGTCGGA GGCCACGGTG GGCTTCAGCG ATCCCAACGT GATCCTGATC GCCGCGCTGT TCGTGATTGG TGAAGGGTTG GTGCGTACCG GCGTGGCATA TCAGGTCGGT GACTGGCTGG TGAAGGTGGC CGGCAGCAGC GAAACCAGGA TGCTGATGTT GCTGATGGTC ACCGTGGCCG GCCTGGGGGC TTTTATGAGC TCGACCGGCG TGGTGGCGAT CTTTATCCCG GTGGTGCTCA GCGTGGCGGC GCGGATGAAA ATTCCCCCCG GCAGGTTGAT GATGCCGCTG AGTTTTGCTG GTTTAATTAG CGGCATGATG ACGCTGGTGG CGACGCCGCC GAACATGGTG GTGAACAGTG AACTGGTGCG CGAGGGCATT GGCGGCTTTG GCTTCTTTGC TGTGACGCCG GTCGGCCTGG CGGTGCTGGT GCTGGGCGTG GGTTATATGT TGGTGGCCCG GCGCTGGCTG GGCAATGACG ACGGTGATAA AACGCGTGAA ACCTGGCAGC GCCGTACCTT CCGCGATCTG ATCCGCGACT ATAAGTTGAC CGGCCGTGCC CGTCGACTGG CGTTACGCAG CGGCTCGCCG CTGGTAGGGC ATTCACTGGA CGAATTGCAC CTGCGCGCCC GTTACGGTGC CAACGTGGTG GGGATTGAAC GCTGGAAGCG CTTCCGGCGG GTGATGGTTA GCGCGTCCGG CAGCACCGAG CTGCGCGAAG GGGACGTACT GCTGCTCGAC ATGTCGGACA GCCAGGTCGA TTTGCGCGAG TTTTGCAGCG AACAGCAGCT GGAACCGATG GTTCTGCGTG GCGATTATTT CTCCGAACAG TCGCGCAACG TCGGCATGGC GGAAGTATCG CTGATCCCCG ATTCAACGTT ATTGGGGAAA AGCCTGCGCG AATCCACTTT CCGCAGCCGT TATGATTTGA ACGTGGTCGG TATTCGCCGC AATGGCGAAA CCCTGGCAGG CAAGCTGGTG GATGAGCCCC TGGCGTTGGG CGATATTCTG TTGGTGATCG GCGACTGGAA GGCGATCCGT CAACTGCAGG CGAAAACCCA TGATTTTATC GTACTCAATC TGCCGGCCGA GGTTGACGAG GTGGCGCCGG CCATTACTCA GGCACCGCAC GCCTTGTTCT GCCTGGCACT GATGGTGGCG ATGATGCTGA CCGATGAAAT CCCTAACCCG ATCGCCGCGC TGATTGCCTG CCTGTTGATG GGCAAGTTCC GCTGCATCGA CATGGAAAGC GCCTATAAGT CGATTCACTG GCCGAGCATT ATCTTGATTG TCGGCATGAT GCCGTTTGCC CAGGCGTTGC AAAAGACCGG TGGGGTGGAT TTGATCGTGC GCGGGTTAAT GGACGTCGCC GGAGATGCCG GGCCGCGGGT GATGCTGGTG TGCCTGTTTG CGCTGTGCGC CACTATTGGC CTGTTTATCT CCAATACCGC CACCGCCGTA TTAATGGCAC CGATCGCCAT TGCCGCTGCG CGTGAAATGG GCGTTTCACC GTACCCGTTT GCCATGATTA TTGCCATCGC CGCTTCGGCC GCGTTTATGA CGCCAGTTTC TTCGCCGGTG AACACGCTGG TGCTGGGGCC GGGGAATTAT AAGTTCGGGG ATTTCGTGCG TATCGGCGTG CCGTTCACGC TGTTGGTGAT GTTGGTCAGT GTGATTATCG TGCCCTGGCT GTATGCATTT TGA
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Protein sequence | MNSELLWVLS LLLIAIVLFT TNKLRMDVVA LLVIIAFVLS GTLTLSEATV GFSDPNVILI AALFVIGEGL VRTGVAYQVG DWLVKVAGSS ETRMLMLLMV TVAGLGAFMS STGVVAIFIP VVLSVAARMK IPPGRLMMPL SFAGLISGMM TLVATPPNMV VNSELVREGI GGFGFFAVTP VGLAVLVLGV GYMLVARRWL GNDDGDKTRE TWQRRTFRDL IRDYKLTGRA RRLALRSGSP LVGHSLDELH LRARYGANVV GIERWKRFRR VMVSASGSTE LREGDVLLLD MSDSQVDLRE FCSEQQLEPM VLRGDYFSEQ SRNVGMAEVS LIPDSTLLGK SLRESTFRSR YDLNVVGIRR NGETLAGKLV DEPLALGDIL LVIGDWKAIR QLQAKTHDFI VLNLPAEVDE VAPAITQAPH ALFCLALMVA MMLTDEIPNP IAALIACLLM GKFRCIDMES AYKSIHWPSI ILIVGMMPFA QALQKTGGVD LIVRGLMDVA GDAGPRVMLV CLFALCATIG LFISNTATAV LMAPIAIAAA REMGVSPYPF AMIIAIAASA AFMTPVSSPV NTLVLGPGNY KFGDFVRIGV PFTLLVMLVS VIIVPWLYAF
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