Gene Spro_3268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3268 
Symbol 
ID5606856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3605708 
End bp3608581 
Gene Length2874 bp 
Protein Length957 aa 
Translation table11 
GC content53% 
IMG OID640938814 
Producthybrid sensory kinase in two-component regulatory system with RcsB and YojN 
Protein accessionYP_001479494 
Protein GI157371505 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00176531 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAATATT TAGCTTCTTT TCGCACCACG TTAAAGATAT CCCGCTATTT GTTCCGGGTG 
CTGGCGATCA TGTTGTGGTC GTTGGGGGCG TTGCTCACCA CCTTCTATAT CCTGAATATC
CTGCATCAGA AAGAGTCTGA TATTCGGCAG GACTACAATC TGAACTTCGA TCAGGCTCAG
GGTTATATCC GCCATTCGGC CGATATCATG CGTGATATCA AATATATGGC GGAAAACCGT
CTCAACGGTT CAGTCAGTAG CATGGACATG TTTAGCGGCA TCTTTCCCGG CAAAAACAGT
CCGCTGGAGT TTGTACCGCT GTATCCAGAG TCCAGTTGTT CACTTAACAC CACCTACCGC
AGCTCACTCA ATTCTCTGAG TGGGTTGATC CAGTATTGGA AAGAGAACTT CGTTGCGGCC
TACGATCTCA ACCGGGTGTT TTTCATCGAC GGCGATACGC TGTGCATGGC GGAGTTTGGC
GGCAGCGGCA GCGGCGTAGC TAATCGAGCC GACGCGCTGA AAACTCTGCA TGAGCGTATC
CTTAAATACC GTAATGCCAA GAATCAGGAC AAAGACAATA ATCTGTACTG GATCAGCCCA
AGCCAGCAAC GGCCGGATGT CGGTTATCTG TATGTACTGA CGCCAATTTA TATTGGTAAC
AAGCTGGAGG CGTTGCTGGG TATTGAGCAA ACCATTCGCC TGGAGGACTT TGTTTCCGCT
GGCAGCTTGC CGACCGGCGT AACCCTGTTG GATGAGAATA ACCAACCGAT ACTGCGGCTG
GCCGATGATG GGCGAGATGC GAACGCTCCC AGCAGCTATC CGGACGAACC GGCTTACTTC
GGCTATGTAG ATAATTACCG CGACCTGATC ATGAAAAAAG CGCTGCCGCC GTCATCGCTC
AGTATTGTTT ATTCTGTACC GGTGAAGACG GTGGTTGAAC GCTTCAGGAT GCTAATCCTC
AATGCGGTGC TGTTGAATAT GTTGTCTGCC ATTGTGTTGT TCAGCCTGGC CTGGCTGTTT
GAGCGCAAAA TGTTCCTGCC GGCAGAAGAC AACGCCTTCC GGCTGGAGGA GCATGAACAG
TTCAACCGCA AGATTGTCGC CTCGGCACCG GTGGGTATTT GTATTTTGCG TATCAGTGAC
GGCACCAACA TTCTGAGTAA TGAATTGGCG CATAACTACA TCAACCTGCT GACCCACGAA
GACCGTGACC GCATTACGCG CATCATCTGC GAACAGCAGG TGAACTTTGT GGATGTGATG
ACCAGTAATA ACAACAACCT GCAAATCAGC TTTGTTCATT CCCGTTACCG TAACGAGGAT
GTGGCGATCT GTGTGCTGGT GGACGTCAGC GCCCGCGTGA AAATGGAAGA GTCGCTGCAG
GAGATGGCGG CGGCGGCAGA GCAGGCCAGC CAATCCAAGT CGATGTTCCT GGCGACCGTC
AGTCACGAAT TGCGTACGCC GCTGTACGGC ATCATCGGTA ACCTCGATTT GTTGCAAACC
AAGGCGTTAC CGCAGGGCGT TGACCGACTG GTCAATGCGA TGAACAACTC GTCCGGGCTA
TTGCTGAAGA TCATCAGCGA CATACTGGAT TTCTCCAAAA TCGAATCCGA GCAACTGAAG
ATTGAACCGC GCGAGTTCTC CTGCCTGGAG GTGATCACCC ACATCGCCGG CAACTATTTG
CCGCTGGTGG TGAAGAAGCG GTTGGGGTTG TACTGCTTTA TCGAACAGAA CGTCCCGGAG
CGCATTTCCG GCGATCCGGT ACGGTTGCAG CAGGTGCTGT CCAACTTGTT GAACAACGCG
ATTAAGTTTA CCGATACCGG CTGCATCATT CTGCAGGTGT GTACGCGCGG CAGCTATTTG
GAGTTTAGCG TTCGTGATAC CGGGGTCGGC ATCCCGGAGA AAGAAATTAC CCGCCTGTTT
GATCCGTTCT TCCAGGTGGG TAGCGGCGTG CAACGCCATT TCCAGGGCAC CGGGCTGGGG
TTGGCGATAT GCGAAAAACT GATCAACATG ATGGATGGCG ACATTGCCGT TGAGTCTGAG
CCGGGATTAG GCAGCCTGTT CACCATCCGC ATTCCGCTGT TTAACGCTCA GTTCCCGATC
CCACAGCCCA GTGATACCTG GCAAGGTAAA ACTCTGTGGC TGGCTATCCG CAACCAGCGG
TTGGAAAGTT ATCTGATGGA GGTTCTTGGC GGCTATGGCG CGACGGTACT GCGTCATCAG
GGGCAAGAGA CTGCGGCAGG GGATGTGATG CTCAGCGATC ATCCGCTGAT GATCAATACA
CCGCTGCTGG CGCAGATCCA GTTCTCTATT GAGCATATTG GCCCGTCGCA GGAAACCCGG
CCGGGCTATT GGATGCACAG CACTTCGACG CCGCGTGAAA CCCTGGCGCT GCTCAACCGC
TTGTTTGGTA CCCGTGATGA AAGCGGCAAT ACTTTGATGC AATTGCCGTT GCCGGCCAAG
GCCAACAGGG TAGACAACGG GGATATTCAT TTGCTGGTGG TGGATGACCA CCCGATTAAC
CGCCGGTTGC TGTCCGACCA GCTTGGCTCA CTGGGCTATC AGGTAGTGAC TGCCAATGAT
GGGGTTGATG CGCTCGACGT GTTGAATCGC AATACTGTCG ACATCGTGCT GACCGACGTC
AATATGCCTA ATATGGATGG CTACCGTTTG ACCCAGCGCC TGCGCCAGTT GCACTTTACC
GCTCCGGTAA TCGGCGTGAC GGCGAATGCC CTGGCGGAAG AAAAACAGCG CTGTATTGAG
GCCGGGATGG ATAACTGCCT GTCTAAGCCG GTGACCCTGG AAACGCTGGA ACAGACATTA
GGGTATTACA GCCAACAGGT TCGCCGCATG CGCGCTGAGT CTGAAGATGC CTGA
 
Protein sequence
MKYLASFRTT LKISRYLFRV LAIMLWSLGA LLTTFYILNI LHQKESDIRQ DYNLNFDQAQ 
GYIRHSADIM RDIKYMAENR LNGSVSSMDM FSGIFPGKNS PLEFVPLYPE SSCSLNTTYR
SSLNSLSGLI QYWKENFVAA YDLNRVFFID GDTLCMAEFG GSGSGVANRA DALKTLHERI
LKYRNAKNQD KDNNLYWISP SQQRPDVGYL YVLTPIYIGN KLEALLGIEQ TIRLEDFVSA
GSLPTGVTLL DENNQPILRL ADDGRDANAP SSYPDEPAYF GYVDNYRDLI MKKALPPSSL
SIVYSVPVKT VVERFRMLIL NAVLLNMLSA IVLFSLAWLF ERKMFLPAED NAFRLEEHEQ
FNRKIVASAP VGICILRISD GTNILSNELA HNYINLLTHE DRDRITRIIC EQQVNFVDVM
TSNNNNLQIS FVHSRYRNED VAICVLVDVS ARVKMEESLQ EMAAAAEQAS QSKSMFLATV
SHELRTPLYG IIGNLDLLQT KALPQGVDRL VNAMNNSSGL LLKIISDILD FSKIESEQLK
IEPREFSCLE VITHIAGNYL PLVVKKRLGL YCFIEQNVPE RISGDPVRLQ QVLSNLLNNA
IKFTDTGCII LQVCTRGSYL EFSVRDTGVG IPEKEITRLF DPFFQVGSGV QRHFQGTGLG
LAICEKLINM MDGDIAVESE PGLGSLFTIR IPLFNAQFPI PQPSDTWQGK TLWLAIRNQR
LESYLMEVLG GYGATVLRHQ GQETAAGDVM LSDHPLMINT PLLAQIQFSI EHIGPSQETR
PGYWMHSTST PRETLALLNR LFGTRDESGN TLMQLPLPAK ANRVDNGDIH LLVVDDHPIN
RRLLSDQLGS LGYQVVTAND GVDALDVLNR NTVDIVLTDV NMPNMDGYRL TQRLRQLHFT
APVIGVTANA LAEEKQRCIE AGMDNCLSKP VTLETLEQTL GYYSQQVRRM RAESEDA