| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3262 |
|---|
| Symbol | |
|---|
| ID | 5606837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 3597923 |
|---|
| End bp | 3598501 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640938808 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001479488 |
|---|
| Protein GI | 157371499 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00457442 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGTTG CCCCCAGTAC TTTGCCACCA CGTCAGCGCA TCCTGCTGAC AGCGCATGAT
TTGTTTTACC GCGATGGCAT ACGCGCGACC GGCATTGATC GCATCATCAG CGAGTCAGGC
GTAGCCAAGG TCACGTTTTA TCGTCATTTC CCCAGTAAAA ATGAGCTGAT TGAGGCGTTT
CTTGCCTACC GTCATGATCA GTGGCTGAGC TGGTTCAGTC GGTCTTTGGA GCAGCAGGCC
ACCCGACGAG GAGATGTGAT GCTCGCTTTG GTGCCCTGCC TTGAGGAATG GTTCAGCAGC
CCGCATTACC GCGGTTGTGC TTTTATCAAC ACGGCGGTGG AGCTGGCGGA TATGTTACCG
GAGAGCCTAA AAATCGCACG CCTGCATAAG AAGCAGATGG CCGAAGTCAT TGCCAGCCAC
CTGCCCACAA GCCCTGAGCG GGAACAGCGA GCGGAGATGC TGTCGATGCT GATTGACGGA
GCCATCGTCA AGGTACAAAT TGAGCAGCAA CCCCAGAACG CGCTGCTGCT GCTAAGTGAA
ATGCTGAAGA CACTGGCTGC CGCCTGGAAG CATCAGTAA
|
|---|
| Protein sequence | MSVAPSTLPP RQRILLTAHD LFYRDGIRAT GIDRIISESG VAKVTFYRHF PSKNELIEAF
LAYRHDQWLS WFSRSLEQQA TRRGDVMLAL VPCLEEWFSS PHYRGCAFIN TAVELADMLP
ESLKIARLHK KQMAEVIASH LPTSPEREQR AEMLSMLIDG AIVKVQIEQQ PQNALLLLSE
MLKTLAAAWK HQ
|
|---|
| |